DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and ZKSCAN2

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_001012999.3 Gene:ZKSCAN2 / 342357 HGNCID:25677 Length:967 Species:Homo sapiens


Alignment Length:248 Identity:94/248 - (37%)
Similarity:124/248 - (50%) Gaps:18/248 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   349 VNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTN 413
            |.|.|...|:.|:|.....:||.|....:.. |.|..:.|::|.||||.:.|...|..|.|.||.
Human   736 VVHQRPFVGKRPYRLLKYGESFGRSTRLMCR-MTHHKENPYKCGVCGKCFGRSRSLIRHQRIHTG 799

  Fly   414 ETPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYC 478
            |.||:|..|||||:...:|..|...||||.|:||..|.|.|::...|:.|.|.||||.|::|..|
Human   800 EKPFKCLDCGKSFNDSSNFGAHQRIHTGEKPYRCGECGKCFSQSSSLIIHQRTHTGEKPYQCGEC 864

  Fly   479 MKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEH 543
            .|:||...|...|.|.||||.|:||..|.|:|........|.|.||||.|:.|..|.|.|::...
Human   865 GKSFTNSSHFSAHRRVHTGENPYKCVDCEKSFNNCTRFREHRRIHTGEKPYGCAQCGKRFSKSSV 929

  Fly   544 LTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPH--KCEYCQKTF 594
            ||.|...|..:.|               |.:...|:..::||  |.:..:|||
Human   930 LTKHREVHVREKP---------------LPHPPSLYCPENPHKGKTDEFRKTF 967

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368
C2H2 Zn finger 251..271 CDD:275368
C2H2 Zn finger 279..299 CDD:275368
COG5048 300..723 CDD:227381 94/248 (38%)
C2H2 Zn finger 307..327 CDD:275368
C2H2 Zn finger 335..355 CDD:275368 3/5 (60%)
C2H2 Zn finger 363..383 CDD:275368 4/19 (21%)
C2H2 Zn finger 391..411 CDD:275368 9/19 (47%)
C2H2 Zn finger 419..439 CDD:275368 8/19 (42%)
C2H2 Zn finger 447..467 CDD:275368 7/19 (37%)
C2H2 Zn finger 475..495 CDD:275368 8/19 (42%)
C2H2 Zn finger 503..523 CDD:275368 6/19 (32%)
C2H2 Zn finger 531..551 CDD:275368 7/19 (37%)
C2H2 Zn finger 559..579 CDD:275368 1/19 (5%)
C2H2 Zn finger 587..607 CDD:275368 3/8 (38%)
C2H2 Zn finger 615..636 CDD:275368
C2H2 Zn finger 644..664 CDD:275368
C2H2 Zn finger 676..696 CDD:275368
C2H2 Zn finger 704..722 CDD:275368
ZKSCAN2NP_001012999.3 SCAN 41..148 CDD:128708
SCAN 41..129 CDD:280241
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 150..205
KRAB_A-box 227..268 CDD:143639
KRAB <248..289 CDD:214630
Myb_DNA-bind_4 340..421 CDD:290549
Myb_DNA-bind_4 497..578 CDD:290549
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 586..626
COG5048 771..>957 CDD:227381 78/200 (39%)
zf-C2H2 775..797 CDD:278523 9/21 (43%)
C2H2 Zn finger 777..797 CDD:275368 9/19 (47%)
zf-H2C2_2 789..813 CDD:290200 13/23 (57%)
zf-C2H2 803..825 CDD:278523 9/21 (43%)
C2H2 Zn finger 805..825 CDD:275368 8/19 (42%)
zf-C2H2 831..853 CDD:278523 8/21 (38%)
C2H2 Zn finger 833..853 CDD:275368 7/19 (37%)
zf-H2C2_2 845..870 CDD:290200 12/24 (50%)
C2H2 Zn finger 861..881 CDD:275368 8/19 (42%)
zf-H2C2_2 873..898 CDD:290200 13/24 (54%)
C2H2 Zn finger 889..909 CDD:275368 6/19 (32%)
zf-H2C2_2 902..925 CDD:290200 10/22 (45%)
C2H2 Zn finger 917..937 CDD:275368 7/19 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 941..967 7/40 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23226
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
22.010

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