DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and Zfp780b

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_001074490.1 Gene:Zfp780b / 338354 MGIID:2444764 Length:806 Species:Mus musculus


Alignment Length:609 Identity:203/609 - (33%)
Similarity:284/609 - (46%) Gaps:57/609 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 QQVTVTTTSSSTSSGGSTTSGGTTTTAGELLMPKMEGGIHGVDGSGNGGNGGGQNVALAPDGTP- 215
            |.:|.....||||.|.:.::                  .||:.   :..:..||.:. ..:|.| 
Mouse   115 QLITFDPKDSSTSIGPNYST------------------FHGLQ---DCQSDAGQQIT-NKEGVPP 157

  Fly   216 -----IATGT---HVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHI 272
                 :|..|   :.|..|||.|..|..|..|:..|:..||:.|:.||:.|...|.||||.|.|.
Mouse   158 HTCQTLAHNTEKPYECKECGKCFGCRSTLTQHQSIHTGEKPYECEECGKAFRLPQQLTRHQKSHS 222

  Fly   273 GGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQY 337
            |...|.|..|...|.....|:.|...|:.:|||.|..|.|:|.|..:|..|...|....|::|..
Mouse   223 GEKPFECNECGKAFHLPDLLKYHKTIHTGEKPFECRECGKSFNRVSNLVAHRIIHADVKPYKCSE 287

  Fly   338 CAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKE 402
            |.|.|.|:.::|.|.:.|:.|.|.:|..|.|.|........|...|||:...:|..|||.:...:
Mouse   288 CGKAFKRRSNLVQHQKTHSDERPFQCKDCGKGFIVLAQLTRHQNIHTGEKSFECHECGKAFRLPQ 352

  Fly   403 HLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQH 467
            .|..|.:||:.|.||:|..|||:|...:....|...||...|..|..|.|:|.|..:|:.|...|
Mouse   353 QLTRHQKSHSGEKPFKCNECGKAFHLPDLLKYHKTIHTSTKPFECRECGKSFHRISNLVEHRLIH 417

  Fly   468 TGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCT 532
            ....||:|:.|.|.|.|.:.|:.|.:.|:||.||:|..|.|||....|:..|...||||...:|.
Mouse   418 ADVKPHKCNECGKAFKRSKSLMQHQKIHSGERPFQCQECGKAFIVLTHLTRHQTIHTGEKSFECN 482

  Fly   533 YCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRK 597
            .|.|.|....||..|...|||:.|..|:.|.|.|..:.:|:.|.::|..:.|.||:.|...|.||
Mouse   483 ECGKKFRTATHLVMHQTIHTGEKPFECNVCGKAFRLQVYLSEHQKIHIEEKPFKCKLCGSAFRRK 547

  Fly   598 EHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQR 662
            ..||.|...|:.:.|:.|..|.|.|.::.:...|.| .|||::||.|:.|||.|.|...|:.||:
Mouse   548 YQLNEHYTIHTDEKPYQCKECGKCFRQRSNFTEHQS-IHTGNKPFECKECGKFFRLNTLLIRHQK 611

  Fly   663 SHTKGQEME------------------------RPFACEKCPKNFICKGHLVSHMRSHSGEKPHA 703
            ||:..:..:                        |||.|:.|.|:|..:..|:.|...|.|.|.:.
Mouse   612 SHSSERPYKCKECGKAFHLPSELNNHQIVHTSNRPFECKVCGKSFKRESTLIQHSVIHGGVKSYE 676

  Fly   704 CTLCSKAFVERGNLKRHMKMNHPD 727
            |..|.|||:.|.:|..|.|: |.|
Mouse   677 CNECGKAFIHRSSLFHHRKI-HSD 699

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368 8/19 (42%)
C2H2 Zn finger 251..271 CDD:275368 10/19 (53%)
C2H2 Zn finger 279..299 CDD:275368 5/19 (26%)
COG5048 300..723 CDD:227381 155/446 (35%)
C2H2 Zn finger 307..327 CDD:275368 7/19 (37%)
C2H2 Zn finger 335..355 CDD:275368 7/19 (37%)
C2H2 Zn finger 363..383 CDD:275368 5/19 (26%)
C2H2 Zn finger 391..411 CDD:275368 6/19 (32%)
C2H2 Zn finger 419..439 CDD:275368 6/19 (32%)
C2H2 Zn finger 447..467 CDD:275368 7/19 (37%)
C2H2 Zn finger 475..495 CDD:275368 7/19 (37%)
C2H2 Zn finger 503..523 CDD:275368 7/19 (37%)
C2H2 Zn finger 531..551 CDD:275368 7/19 (37%)
C2H2 Zn finger 559..579 CDD:275368 6/19 (32%)
C2H2 Zn finger 587..607 CDD:275368 8/19 (42%)
C2H2 Zn finger 615..636 CDD:275368 6/20 (30%)
C2H2 Zn finger 644..664 CDD:275368 9/19 (47%)
C2H2 Zn finger 676..696 CDD:275368 6/19 (32%)
C2H2 Zn finger 704..722 CDD:275368 8/17 (47%)
Zfp780bNP_001074490.1 KRAB 14..75 CDD:214630
C2H2 Zn finger 173..193 CDD:275368 8/19 (42%)
COG5048 197..605 CDD:227381 151/408 (37%)
C2H2 Zn finger 201..221 CDD:275368 10/19 (53%)
C2H2 Zn finger 229..249 CDD:275368 5/19 (26%)
C2H2 Zn finger 257..277 CDD:275368 7/19 (37%)
C2H2 Zn finger 285..305 CDD:275368 7/19 (37%)
C2H2 Zn finger 313..333 CDD:275368 5/19 (26%)
C2H2 Zn finger 341..361 CDD:275368 6/19 (32%)
C2H2 Zn finger 369..389 CDD:275368 6/19 (32%)
C2H2 Zn finger 397..417 CDD:275368 7/19 (37%)
C2H2 Zn finger 425..445 CDD:275368 7/19 (37%)
C2H2 Zn finger 453..473 CDD:275368 7/19 (37%)
C2H2 Zn finger 481..501 CDD:275368 7/19 (37%)
C2H2 Zn finger 509..529 CDD:275368 6/19 (32%)
C2H2 Zn finger 537..557 CDD:275368 8/19 (42%)
C2H2 Zn finger 565..585 CDD:275368 6/20 (30%)
C2H2 Zn finger 593..613 CDD:275368 9/19 (47%)
C2H2 Zn finger 621..641 CDD:275368 0/19 (0%)
C2H2 Zn finger 649..669 CDD:275368 6/19 (32%)
C2H2 Zn finger 677..697 CDD:275368 9/20 (45%)
C2H2 Zn finger 705..725 CDD:275368
C2H2 Zn finger 733..753 CDD:275368
C2H2 Zn finger 761..781 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 505 1.000 Inparanoid score I1328
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100020
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.950

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