DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and Gm14325

DIOPT Version :10

Sequence 1:NP_477243.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_001020020.2 Gene:Gm14325 / 329575 MGIID:3702875 Length:498 Species:Mus musculus


Alignment Length:445 Identity:174/445 - (39%)
Similarity:239/445 - (53%) Gaps:5/445 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   260 TSQDLTRHGKIHIGGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHF 324
            ||:...||.:..........|.|...||..:..:||..:|:.:|...|..|.|.|.....|..|.
Mouse    58 TSRSHGRHERSCSAEQPSEFIQCGKAFAYESGRQRHQIKHTGEKHHDCNQCGKDFRTWNVLQIHK 122

  Fly   325 RSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPH 389
            |:||||.|:.|:.|.|.|.|..|:..|.|.|.||..:.|:.|.|:|.|:.....|...|||:.|:
Mouse   123 RTHTGEKPYDCKQCGKAFARSCHLRIHNRTHAGEKQYECNQCGKAFKRRSDLQIHKRTHTGEKPY 187

  Fly   390 QCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTF 454
            :|..|||.:.....|..|.|:||.|.|:.|:.|||:||:..|...|...||||.|:.|:.|.|.|
Mouse   188 ECKQCGKAFVSSGELQKHKRTHTGEKPYECKQCGKAFSQSSHLRIHKRTHTGEKPYECNQCGKAF 252

  Fly   455 TRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNH 519
            .|...|..|.|.||||.|:.|..|.|.|....||..|.|:|||:.|::|..|.|||.....:..|
Mouse   253 ARSGDLQKHKRTHTGEKPYECKQCGKAFAHSSHLHIHERRHTGDKPYECKQCGKAFAVFYTLQMH 317

  Fly   520 VRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSP 584
            .|.|||:.|::|..|.|.||....|..|.:.|||:.|:.|..|.|||::..||..|.|.|||:.|
Mouse   318 KRTHTGDKPYECKQCGKAFTVIYTLQMHKQTHTGEKPYECKQCGKTFSQSRHLRIHKRTHTGEKP 382

  Fly   585 HKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGK 649
            ::|..|.|.|.|......|.|.|:.:.|:.||.|.|.|.|:..|..| .|.|||::|:.|:.|||
Mouse   383 YECNQCGKAFARSGDQQEHKRTHTGEKPYECNQCGKAFIRRRVLQIH-KRTHTGEKPYECKQCGK 446

  Fly   650 SFPLKGNLLFHQRSHTKGQEMERPFACEKCPKNFICKGHLVSHMRSHSGEKPHAC 704
            :|....:|..|:|:|:.    |:|:.|::|.|.|....||..|.::|:||:|:.|
Mouse   447 AFASSSDLQKHKRTHSG----EKPYECKQCGKAFAQSSHLRIHKQTHTGERPYEC 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_477243.1 C2H2 Zn finger 223..243 CDD:275368
C2H2 Zn finger 251..271 CDD:275368 4/10 (40%)
C2H2 Zn finger 279..299 CDD:275368 6/19 (32%)
COG5048 300..723 CDD:227381 163/405 (40%)
C2H2 Zn finger 307..327 CDD:275368 7/19 (37%)
C2H2 Zn finger 335..355 CDD:275368 8/19 (42%)
C2H2 Zn finger 363..383 CDD:275368 6/19 (32%)
C2H2 Zn finger 391..411 CDD:275368 7/19 (37%)
C2H2 Zn finger 419..439 CDD:275368 8/19 (42%)
C2H2 Zn finger 447..467 CDD:275368 8/19 (42%)
C2H2 Zn finger 475..495 CDD:275368 8/19 (42%)
C2H2 Zn finger 503..523 CDD:275368 7/19 (37%)
C2H2 Zn finger 531..551 CDD:275368 7/19 (37%)
C2H2 Zn finger 559..579 CDD:275368 9/19 (47%)
C2H2 Zn finger 587..607 CDD:275368 7/19 (37%)
C2H2 Zn finger 615..636 CDD:275368 9/20 (45%)
C2H2 Zn finger 644..664 CDD:275368 8/19 (42%)
C2H2 Zn finger 676..696 CDD:275368 7/19 (37%)
C2H2 Zn finger 704..722 CDD:275368 1/1 (100%)
Gm14325NP_001020020.2 KRAB 3..44 CDD:460171
C2H2 Zn finger 79..97 CDD:275368 5/17 (29%)
C2H2 Zn finger 105..125 CDD:275368 7/19 (37%)
COG5048 129..498 CDD:227381 151/374 (40%)
C2H2 Zn finger 133..153 CDD:275368 8/19 (42%)
C2H2 Zn finger 161..181 CDD:275368 6/19 (32%)
C2H2 Zn finger 189..209 CDD:275368 7/19 (37%)
C2H2 Zn finger 217..237 CDD:275368 8/19 (42%)
C2H2 Zn finger 245..265 CDD:275368 8/19 (42%)
C2H2 Zn finger 273..293 CDD:275368 8/19 (42%)
C2H2 Zn finger 301..321 CDD:275368 7/19 (37%)
C2H2 Zn finger 329..349 CDD:275368 7/19 (37%)
C2H2 Zn finger 357..377 CDD:275368 9/19 (47%)
C2H2 Zn finger 385..405 CDD:275368 7/19 (37%)
C2H2 Zn finger 413..433 CDD:275368 9/20 (45%)
C2H2 Zn finger 441..461 CDD:275368 8/19 (42%)
C2H2 Zn finger 469..489 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.

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