DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and Gm14325

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_001020020.2 Gene:Gm14325 / 329575 MGIID:3702875 Length:498 Species:Mus musculus


Alignment Length:445 Identity:174/445 - (39%)
Similarity:239/445 - (53%) Gaps:5/445 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   260 TSQDLTRHGKIHIGGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHF 324
            ||:...||.:..........|.|...||..:..:||..:|:.:|...|..|.|.|.....|..|.
Mouse    58 TSRSHGRHERSCSAEQPSEFIQCGKAFAYESGRQRHQIKHTGEKHHDCNQCGKDFRTWNVLQIHK 122

  Fly   325 RSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPH 389
            |:||||.|:.|:.|.|.|.|..|:..|.|.|.||..:.|:.|.|:|.|:.....|...|||:.|:
Mouse   123 RTHTGEKPYDCKQCGKAFARSCHLRIHNRTHAGEKQYECNQCGKAFKRRSDLQIHKRTHTGEKPY 187

  Fly   390 QCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTF 454
            :|..|||.:.....|..|.|:||.|.|:.|:.|||:||:..|...|...||||.|:.|:.|.|.|
Mouse   188 ECKQCGKAFVSSGELQKHKRTHTGEKPYECKQCGKAFSQSSHLRIHKRTHTGEKPYECNQCGKAF 252

  Fly   455 TRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNH 519
            .|...|..|.|.||||.|:.|..|.|.|....||..|.|:|||:.|::|..|.|||.....:..|
Mouse   253 ARSGDLQKHKRTHTGEKPYECKQCGKAFAHSSHLHIHERRHTGDKPYECKQCGKAFAVFYTLQMH 317

  Fly   520 VRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSP 584
            .|.|||:.|::|..|.|.||....|..|.:.|||:.|:.|..|.|||::..||..|.|.|||:.|
Mouse   318 KRTHTGDKPYECKQCGKAFTVIYTLQMHKQTHTGEKPYECKQCGKTFSQSRHLRIHKRTHTGEKP 382

  Fly   585 HKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGK 649
            ::|..|.|.|.|......|.|.|:.:.|:.||.|.|.|.|:..|..| .|.|||::|:.|:.|||
Mouse   383 YECNQCGKAFARSGDQQEHKRTHTGEKPYECNQCGKAFIRRRVLQIH-KRTHTGEKPYECKQCGK 446

  Fly   650 SFPLKGNLLFHQRSHTKGQEMERPFACEKCPKNFICKGHLVSHMRSHSGEKPHAC 704
            :|....:|..|:|:|:.    |:|:.|::|.|.|....||..|.::|:||:|:.|
Mouse   447 AFASSSDLQKHKRTHSG----EKPYECKQCGKAFAQSSHLRIHKQTHTGERPYEC 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368
C2H2 Zn finger 251..271 CDD:275368 4/10 (40%)
C2H2 Zn finger 279..299 CDD:275368 6/19 (32%)
COG5048 300..723 CDD:227381 163/405 (40%)
C2H2 Zn finger 307..327 CDD:275368 7/19 (37%)
C2H2 Zn finger 335..355 CDD:275368 8/19 (42%)
C2H2 Zn finger 363..383 CDD:275368 6/19 (32%)
C2H2 Zn finger 391..411 CDD:275368 7/19 (37%)
C2H2 Zn finger 419..439 CDD:275368 8/19 (42%)
C2H2 Zn finger 447..467 CDD:275368 8/19 (42%)
C2H2 Zn finger 475..495 CDD:275368 8/19 (42%)
C2H2 Zn finger 503..523 CDD:275368 7/19 (37%)
C2H2 Zn finger 531..551 CDD:275368 7/19 (37%)
C2H2 Zn finger 559..579 CDD:275368 9/19 (47%)
C2H2 Zn finger 587..607 CDD:275368 7/19 (37%)
C2H2 Zn finger 615..636 CDD:275368 9/20 (45%)
C2H2 Zn finger 644..664 CDD:275368 8/19 (42%)
C2H2 Zn finger 676..696 CDD:275368 7/19 (37%)
C2H2 Zn finger 704..722 CDD:275368 1/1 (100%)
Gm14325NP_001020020.2 KRAB 5..>45 CDD:214630
KRAB 5..43 CDD:279668
COG5048 74..459 CDD:227381 154/385 (40%)
C2H2 Zn finger 79..97 CDD:275368 5/17 (29%)
C2H2 Zn finger 105..125 CDD:275368 7/19 (37%)
zf-H2C2_2 118..142 CDD:290200 12/23 (52%)
C2H2 Zn finger 133..153 CDD:275368 8/19 (42%)
C2H2 Zn finger 161..181 CDD:275368 6/19 (32%)
zf-H2C2_2 173..198 CDD:290200 9/24 (38%)
C2H2 Zn finger 189..209 CDD:275368 7/19 (37%)
zf-H2C2_2 201..226 CDD:290200 12/24 (50%)
C2H2 Zn finger 217..237 CDD:275368 8/19 (42%)
zf-H2C2_2 229..254 CDD:290200 11/24 (46%)
C2H2 Zn finger 245..265 CDD:275368 8/19 (42%)
zf-H2C2_2 257..282 CDD:290200 12/24 (50%)
C2H2 Zn finger 273..293 CDD:275368 8/19 (42%)
C2H2 Zn finger 301..321 CDD:275368 7/19 (37%)
zf-H2C2_2 314..337 CDD:290200 9/22 (41%)
C2H2 Zn finger 329..349 CDD:275368 7/19 (37%)
zf-H2C2_2 342..366 CDD:290200 11/23 (48%)
C2H2 Zn finger 357..377 CDD:275368 9/19 (47%)
zf-H2C2_2 369..394 CDD:290200 12/24 (50%)
C2H2 Zn finger 385..405 CDD:275368 7/19 (37%)
zf-H2C2_2 399..422 CDD:290200 9/22 (41%)
C2H2 Zn finger 413..433 CDD:275368 9/20 (45%)
zf-H2C2_2 426..450 CDD:290200 12/24 (50%)
C2H2 Zn finger 441..461 CDD:275368 8/19 (42%)
zf-H2C2_2 453..478 CDD:290200 10/28 (36%)
C2H2 Zn finger 469..489 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100020
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.900

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