DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and Zfp182

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:XP_036017871.1 Gene:Zfp182 / 319535 MGIID:2442220 Length:682 Species:Mus musculus


Alignment Length:556 Identity:207/556 - (37%)
Similarity:291/556 - (52%) Gaps:56/556 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 QVTVTTTSSSTSSGGSTTS--GGTTTTAGELLMPKMEGGIHGVDGSGNGGNGGGQNVALAPDGTP 215
            ||.:...:..|.||.:.|.  .....:.| ||:|....  |..:..||          ...|...
Mouse   177 QVRLPNDNIITKSGQNYTDFRNAFHLSTG-LLVPMQRS--HKFESFGN----------TMVDNLN 228

  Fly   216 IATGTHVCDI----CGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPM 276
            :.||:...:.    |.|.|       .|..|  |...|:.:.|  |:...:...|..|       
Mouse   229 LLTGSSTENKHDTGCAKFF-------FHTEY--ENPNFIVKPC--GYKEYEKTLRQKK------- 275

  Fly   277 FTCIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKT 341
                          .|..|.:..:.::||.||.|||||::|.||..|:|:||||.||.|..|.|.
Mouse   276 --------------GLSLHQRIKNGERPFECTACQKTFSKKSHLIVHWRTHTGEKPFECSECGKA 326

  Fly   342 FTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLAN 406
            |::|..::.|:|.||||.|..|..|.|:|..|...:.||..|||:.|::|:.|||.:|:|.:|..
Mouse   327 FSQKSQLIIHLRTHTGERPFACPECGKAFREKSTVIIHYRTHTGEKPYECNQCGKAFTQKSNLIV 391

  Fly   407 HMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGES 471
            |.::||.|..:.|..||:||.:|.....|...|||:.||.|..|.|||:.|..|:.|.|.||||.
Mouse   392 HQKTHTGEKTYECTKCGESFIQKLDLIIHHSTHTGKKPHECSECKKTFSDKSTLVIHQRTHTGEK 456

  Fly   472 PHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTK 536
            ||:|:.|.|:|..|..|:.|.|.||||.|::|..|.|.||:|.::..|.|.|:||.|.:|..|.|
Mouse   457 PHKCTECGKSFNEKSTLIVHQRIHTGEKPYECDVCGKTFTQKSNLGVHQRTHSGEKPFECNECEK 521

  Fly   537 TFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLN 601
            .|::|.:|..|.|.|||:.|:.|:.|:|.|::|.:|..|.|.||.:.|:||..|.|.|..|..|.
Mouse   522 AFSQKSYLMLHQRGHTGEKPYECNECEKAFSQKSYLIIHQRTHTEEKPYKCNECGKAFREKSKLI 586

  Fly   602 NHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTK 666
            .|.|.|:.:.|:.|.||.|.|::|..||.| .|.|||::|:.|..|||:|..|.....|||:||.
Mouse   587 IHQRIHTGEKPYECLVCWKAFSQKSQLIIH-QRTHTGEKPYECTECGKAFREKSTFTVHQRTHTG 650

  Fly   667 GQEMERPFACEKCPKNFICKGHLVSHMRSHSGEKPH 702
                |:|:.|.:|.|.|..|.:|:.|.|:|:.:|.|
Mouse   651 ----EKPYKCIECGKAFTQKSNLIVHQRTHTVKKAH 682

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368 4/23 (17%)
C2H2 Zn finger 251..271 CDD:275368 4/19 (21%)
C2H2 Zn finger 279..299 CDD:275368 2/19 (11%)
COG5048 300..723 CDD:227381 178/403 (44%)
C2H2 Zn finger 307..327 CDD:275368 12/19 (63%)
C2H2 Zn finger 335..355 CDD:275368 7/19 (37%)
C2H2 Zn finger 363..383 CDD:275368 7/19 (37%)
C2H2 Zn finger 391..411 CDD:275368 8/19 (42%)
C2H2 Zn finger 419..439 CDD:275368 7/19 (37%)
C2H2 Zn finger 447..467 CDD:275368 9/19 (47%)
C2H2 Zn finger 475..495 CDD:275368 8/19 (42%)
C2H2 Zn finger 503..523 CDD:275368 8/19 (42%)
C2H2 Zn finger 531..551 CDD:275368 8/19 (42%)
C2H2 Zn finger 559..579 CDD:275368 8/19 (42%)
C2H2 Zn finger 587..607 CDD:275368 8/19 (42%)
C2H2 Zn finger 615..636 CDD:275368 10/20 (50%)
C2H2 Zn finger 644..664 CDD:275368 9/19 (47%)
C2H2 Zn finger 676..696 CDD:275368 8/19 (42%)
C2H2 Zn finger 704..722 CDD:275368
Zfp182XP_036017871.1 KRAB 63..139 CDD:214630
COG5048 288..677 CDD:227381 175/393 (45%)
C2H2 Zn finger 292..312 CDD:275368 12/19 (63%)
C2H2 Zn finger 320..340 CDD:275368 7/19 (37%)
C2H2 Zn finger 348..368 CDD:275368 7/19 (37%)
C2H2 Zn finger 376..396 CDD:275368 8/19 (42%)
C2H2 Zn finger 404..424 CDD:275368 7/19 (37%)
C2H2 Zn finger 432..452 CDD:275368 9/19 (47%)
C2H2 Zn finger 460..480 CDD:275368 8/19 (42%)
C2H2 Zn finger 488..508 CDD:275368 8/19 (42%)
C2H2 Zn finger 516..536 CDD:275368 8/19 (42%)
C2H2 Zn finger 544..564 CDD:275368 8/19 (42%)
C2H2 Zn finger 572..592 CDD:275368 8/19 (42%)
C2H2 Zn finger 600..620 CDD:275368 10/20 (50%)
C2H2 Zn finger 628..648 CDD:275368 9/19 (47%)
C2H2 Zn finger 656..676 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 505 1.000 Inparanoid score I1328
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100020
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.860

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