DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and ZNF354C

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_055409.1 Gene:ZNF354C / 30832 HGNCID:16736 Length:554 Species:Homo sapiens


Alignment Length:466 Identity:154/466 - (33%)
Similarity:229/466 - (49%) Gaps:60/466 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   245 ERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNTSL--------ERHMKRHST 301
            |:||....:.....|.|:| ..|..:.:|..:||          ||:|        ||....:.|
Human   139 EKKPLRQMIDSHEKTISED-GNHTSLELGKSLFT----------NTALVTQQSVPIERIPNMYYT 192

  Fly   302 DKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDIC 366
               |.     |.|.:...|...|:.:.|..|..|..|.|:|.:..|::.|.|.||||.|::|:.|
Human   193 ---FG-----KDFKQNFDLMKCFQIYPGGKPHICNECGKSFKQNLHLIEHQRIHTGEKPYKCNEC 249

  Fly   367 KKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEH 431
            :|:|:.:...::|...|||:.|::|:.|.|.::....|..|:|.||.|.|:||..|||:||:   
Human   250 EKTFSHRSSLLSHQRIHTGEKPYKCNECEKAFSNSSTLIKHLRVHTGEKPYRCRECGKAFSQ--- 311

  Fly   432 FTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHT 496
                              ||.       |..|.|.||||..::|..|.|.|..:..|..|.|.||
Human   312 ------------------CST-------LTVHQRIHTGEKLYKCGECEKAFNCRAKLHRHQRIHT 351

  Fly   497 GETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSY 561
            ||.|:||:.|.|.:::...:..|.|.||||..:.|..|.:||||...|..|.|.|||..|::|:.
Human   352 GEKPYKCSECGKGYSQFTSLAEHQRFHTGEQLYTCLECGRTFTRIVTLIEHQRIHTGQKPYQCNE 416

  Fly   562 CKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKE 626
            |:|.|.:......|.::|||:..:.||.|.|.|..|.:|..|.|.|:.:.|:.||.|.|.|::..
Human   417 CEKAFNQYSSFNEHRKIHTGEKLYTCEECGKAFGCKSNLYRHQRIHTGEKPYQCNQCGKAFSQYS 481

  Fly   627 HLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQEMERPFACEKCPKNFICKGHLVS 691
            .|..| .|.|||::.:.|..|||::..:.||..|::.|||    |:.:..::..|.|||...|..
Human   482 FLTEH-ERIHTGEKLYKCMECGKAYSYRSNLCRHKKVHTK----EKLYKWKEYGKPFICSSSLTQ 541

  Fly   692 HMRSHSGEKPH 702
            :.|...|:|.:
Human   542 YQRFFKGDKAY 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368
C2H2 Zn finger 251..271 CDD:275368 4/19 (21%)
C2H2 Zn finger 279..299 CDD:275368 5/27 (19%)
COG5048 300..723 CDD:227381 139/403 (34%)
C2H2 Zn finger 307..327 CDD:275368 4/19 (21%)
C2H2 Zn finger 335..355 CDD:275368 7/19 (37%)
C2H2 Zn finger 363..383 CDD:275368 5/19 (26%)
C2H2 Zn finger 391..411 CDD:275368 6/19 (32%)
C2H2 Zn finger 419..439 CDD:275368 6/19 (32%)
C2H2 Zn finger 447..467 CDD:275368 5/19 (26%)
C2H2 Zn finger 475..495 CDD:275368 7/19 (37%)
C2H2 Zn finger 503..523 CDD:275368 5/19 (26%)
C2H2 Zn finger 531..551 CDD:275368 9/19 (47%)
C2H2 Zn finger 559..579 CDD:275368 5/19 (26%)
C2H2 Zn finger 587..607 CDD:275368 9/19 (47%)
C2H2 Zn finger 615..636 CDD:275368 8/20 (40%)
C2H2 Zn finger 644..664 CDD:275368 7/19 (37%)
C2H2 Zn finger 676..696 CDD:275368 6/19 (32%)
C2H2 Zn finger 704..722 CDD:275368
ZNF354CNP_055409.1 KRAB 12..72 CDD:214630
KRAB 12..51 CDD:279668
C2H2 Zn finger 194..210 CDD:275368 4/20 (20%)
C2H2 Zn finger 218..238 CDD:275368 7/19 (37%)
zf-H2C2_2 230..255 CDD:290200 12/24 (50%)
COG5048 242..>541 CDD:227381 117/331 (35%)
C2H2 Zn finger 246..266 CDD:275368 5/19 (26%)
zf-H2C2_2 258..283 CDD:290200 8/24 (33%)
C2H2 Zn finger 274..294 CDD:275368 6/19 (32%)
zf-H2C2_2 287..311 CDD:290200 13/23 (57%)
C2H2 Zn finger 302..322 CDD:275368 11/47 (23%)
zf-H2C2_2 315..339 CDD:290200 11/23 (48%)
C2H2 Zn finger 330..350 CDD:275368 7/19 (37%)
zf-H2C2_2 345..367 CDD:290200 11/21 (52%)
C2H2 Zn finger 358..378 CDD:275368 5/19 (26%)
C2H2 Zn finger 386..406 CDD:275368 9/19 (47%)
zf-H2C2_2 399..423 CDD:290200 11/23 (48%)
C2H2 Zn finger 414..434 CDD:275368 5/19 (26%)
C2H2 Zn finger 442..462 CDD:275368 9/19 (47%)
zf-H2C2_2 454..479 CDD:290200 10/24 (42%)
C2H2 Zn finger 470..490 CDD:275368 8/20 (40%)
zf-H2C2_2 483..507 CDD:290200 10/24 (42%)
C2H2 Zn finger 498..518 CDD:275368 7/19 (37%)
C2H2 Zn finger 526..544 CDD:275368 5/17 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 47 1.000 Domainoid score I11996
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
22.000

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