DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and ZNF841

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_001356754.1 Gene:ZNF841 / 284371 HGNCID:27611 Length:925 Species:Homo sapiens


Alignment Length:558 Identity:208/558 - (37%)
Similarity:289/558 - (51%) Gaps:61/558 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 CDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFA 287
            ||:||::|:....|:.|||.|:..||::|..||:.|:.|..|..|.:||.|...:.|..|...|:
Human   320 CDVCGRIFRQNSDLVNHRRSHTGDKPYICNECGKSFSKSSHLAVHQRIHTGEKPYKCNRCGKCFS 384

  Fly   288 NNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHV 352
            .::||..|...|:.|||:.|..|.|||.|...|..|...|.|:.|:.|..|.|.|.:...:|.|.
Human   385 QSSSLATHQTVHTGDKPYKCNECGKTFKRNSSLTAHHIIHAGKKPYTCDVCGKVFYQNSQLVRHQ 449

  Fly   353 RKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPF 417
            ..||||||::|:.|.|.|.::.....|...|||:.|::|:.|||.:::..|||.|.|.||.|.|:
Human   450 IIHTGETPYKCNECGKVFFQRSRLAGHRRIHTGEKPYKCNECGKVFSQHSHLAVHQRVHTGEKPY 514

  Fly   418 RCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSK----------------------------TF 454
            :|..|||:|:.....|.|...||||.|::|:.|.|                            .|
Human   515 KCNECGKAFNWGSLLTVHQRIHTGEKPYKCNVCGKVFNYGGYLSVHMRCHTGEKPLHCNKCGMVF 579

  Fly   455 TRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNH 519
            |....|..|.|.||||.|::|:.|.|.|....:|..|.|.||||.||:|..|.|.|:....:..|
Human   580 TYYSCLARHQRMHTGEKPYKCNVCGKVFIDSGNLSIHRRSHTGEKPFQCNECGKVFSYYSCLARH 644

  Fly   520 VRQHTGESPHKCTYCTKTFTRKEHLTNHV----------------------------RQHTGDSP 556
            .:.||||.|:||..|.|.:|::..||.|:                            |..||:.|
Human   645 RKIHTGEKPYKCNDCGKAYTQRSSLTKHLVIHTGENPYHCNEFGEAFIQSSKLARYHRNPTGEKP 709

  Fly   557 HRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKP 621
            |:||.|.:||:.|..|..|.|.|||:.|:||..|.|.|.....|..|.|.|:.:.|:.||.|.|.
Human   710 HKCSECGRTFSHKTSLVYHQRRHTGEMPYKCIECGKVFNSTTTLARHRRIHTGEKPYKCNECGKV 774

  Fly   622 FTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQEMERPFACEKCPKNFICK 686
            |..:..|..|.| .|||::|:.|..|||:|.::..||.||..||.    |:|:.|.:|.|.||.:
Human   775 FRYRSGLARHWS-IHTGEKPYKCNECGKAFRVRSILLNHQMMHTG----EKPYKCNECGKAFIER 834

  Fly   687 GHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMN 724
            .:||.|.|:|:||||:.|..|.|||..|..|.:|.:::
Human   835 SNLVYHQRNHTGEKPYKCMECGKAFGRRSCLTKHQRIH 872

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368 9/19 (47%)
C2H2 Zn finger 251..271 CDD:275368 7/19 (37%)
C2H2 Zn finger 279..299 CDD:275368 6/19 (32%)
COG5048 300..723 CDD:227381 179/478 (37%)
C2H2 Zn finger 307..327 CDD:275368 8/19 (42%)
C2H2 Zn finger 335..355 CDD:275368 6/19 (32%)
C2H2 Zn finger 363..383 CDD:275368 5/19 (26%)
C2H2 Zn finger 391..411 CDD:275368 9/19 (47%)
C2H2 Zn finger 419..439 CDD:275368 7/19 (37%)
C2H2 Zn finger 447..467 CDD:275368 8/47 (17%)
C2H2 Zn finger 475..495 CDD:275368 7/19 (37%)
C2H2 Zn finger 503..523 CDD:275368 5/19 (26%)
C2H2 Zn finger 531..551 CDD:275368 8/47 (17%)
C2H2 Zn finger 559..579 CDD:275368 9/19 (47%)
C2H2 Zn finger 587..607 CDD:275368 7/19 (37%)
C2H2 Zn finger 615..636 CDD:275368 8/20 (40%)
C2H2 Zn finger 644..664 CDD:275368 9/19 (47%)
C2H2 Zn finger 676..696 CDD:275368 9/19 (47%)
C2H2 Zn finger 704..722 CDD:275368 8/17 (47%)
ZNF841NP_001356754.1 KRAB 8..69 CDD:214630
COG5048 260..636 CDD:227381 118/315 (37%)
C2H2 Zn finger 265..284 CDD:275368
C2H2 Zn finger 292..312 CDD:275368
C2H2 Zn finger 320..340 CDD:275368 9/19 (47%)
C2H2 Zn finger 348..368 CDD:275368 7/19 (37%)
C2H2 Zn finger 376..396 CDD:275368 6/19 (32%)
C2H2 Zn finger 404..424 CDD:275368 8/19 (42%)
C2H2 Zn finger 432..452 CDD:275368 6/19 (32%)
C2H2 Zn finger 460..480 CDD:275368 5/19 (26%)
COG5048 484..886 CDD:227381 145/394 (37%)
C2H2 Zn finger 488..508 CDD:275368 9/19 (47%)
C2H2 Zn finger 516..536 CDD:275368 7/19 (37%)
C2H2 Zn finger 544..564 CDD:275368 3/19 (16%)
C2H2 Zn finger 572..592 CDD:275368 5/19 (26%)
C2H2 Zn finger 600..620 CDD:275368 7/19 (37%)
C2H2 Zn finger 628..648 CDD:275368 5/19 (26%)
C2H2 Zn finger 656..676 CDD:275368 7/19 (37%)
C2H2 Zn finger 712..732 CDD:275368 9/19 (47%)
C2H2 Zn finger 740..760 CDD:275368 7/19 (37%)
C2H2 Zn finger 768..788 CDD:275368 8/20 (40%)
C2H2 Zn finger 796..816 CDD:275368 9/19 (47%)
C2H2 Zn finger 824..844 CDD:275368 9/19 (47%)
C2H2 Zn finger 852..872 CDD:275368 8/19 (42%)
C2H2 Zn finger 880..900 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 499 1.000 Inparanoid score I1378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100020
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.860

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