DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and ZNF544

DIOPT Version :10

Sequence 1:NP_477243.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_001374339.1 Gene:ZNF544 / 27300 HGNCID:16759 Length:769 Species:Homo sapiens


Alignment Length:554 Identity:194/554 - (35%)
Similarity:287/554 - (51%) Gaps:40/554 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 GGG----QNVALAPDGTPIATGTHVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQ 262
            |||    ..::|.|...|.:||....:...|..:.....|.|.:..::.|......|.:.|..|.
Human   216 GGGYSLPSTLSLLPTTLPTSTGFPKPNSQVKELKQNSAFINHEKNGADGKHCESHQCARAFCQSI 280

  Fly   263 DLTRHGKIHIG--GPM----------FTCIVCF-----------------NVFANNTSLERHMKR 298
            .|::.|.:..|  .|.          :...:||                 |:|:::.||......
Human   281 YLSKLGNVETGKKNPYEYIVSGDSLNYGSSLCFHGRTFSVKKSDDCKDYGNLFSHSVSLNEQKPV 345

  Fly   299 HSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRC 363
            |.....:.|..|::|.:....|....||..|||||||:.....|.......:.....|.|.|..|
Human   346 HFGKSQYECDECRETCSESLCLVQTERSGPGETPFRCEERCAAFPMASSFSDCNIIQTTEKPSVC 410

  Fly   364 DICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSR 428
            :.|.|||:..:  :.|...|||:.|.:|..|||.:::...|..|.|:||.|.|:.|::|||||::
Human   411 NQCGKSFSCCK--LIHQRTHTGEKPFECTQCGKSFSQSYDLVIHQRTHTGEKPYECDLCGKSFTQ 473

  Fly   429 KEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIR 493
            :.....|...||||.|::|..|.|:|....:|:.|.|.||||.|:.|::|.|:|::...||.|.|
Human   474 RSKLITHQRIHTGEKPYQCIECRKSFRWNSNLIVHQRIHTGEKPYECTHCGKSFSQSYELVTHKR 538

  Fly   494 QHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHR 558
            .||||.|||||.|.|:|::|..:|.|.|.||||.|::|..|.|:|::...|..|.|.|||:.|::
Human   539 THTGEKPFKCTQCGKSFSQKYDLVVHQRTHTGEKPYECNLCGKSFSQSSKLITHQRIHTGEKPYQ 603

  Fly   559 CSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFT 623
            |..|.|:|....:|..|.|:|||:.|:.|.:|.|:|::...|..|.|.|:.:.|:.||.|.|.|.
Human   604 CIECGKSFRWNSNLVIHQRIHTGEKPYDCTHCGKSFSQSYQLVAHKRTHTGEKPYECNECGKAFN 668

  Fly   624 RKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQEMERPFACEKCPKNFICKGH 688
            |...||.|: :.|||::|:.|..|.|:|.....|:.|||:||.    |:||.|.:|.|.|....:
Human   669 RSTQLIRHL-QIHTGEKPYKCNQCNKAFARSSYLVMHQRTHTG----EKPFECSQCGKAFSGSSN 728

  Fly   689 LVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMK 722
            |:||.|.||||||:.|:.|.|:|.::..|..|.:
Human   729 LLSHHRIHSGEKPYECSDCGKSFRQQSQLVVHRR 762

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_477243.1 C2H2 Zn finger 223..243 CDD:275368 3/19 (16%)
C2H2 Zn finger 251..271 CDD:275368 5/19 (26%)
C2H2 Zn finger 279..299 CDD:275368 6/36 (17%)
COG5048 300..723 CDD:227381 168/423 (40%)
C2H2 Zn finger 307..327 CDD:275368 5/19 (26%)
C2H2 Zn finger 335..355 CDD:275368 2/19 (11%)
C2H2 Zn finger 363..383 CDD:275368 6/19 (32%)
C2H2 Zn finger 391..411 CDD:275368 7/19 (37%)
C2H2 Zn finger 419..439 CDD:275368 7/19 (37%)
C2H2 Zn finger 447..467 CDD:275368 7/19 (37%)
C2H2 Zn finger 475..495 CDD:275368 8/19 (42%)
C2H2 Zn finger 503..523 CDD:275368 9/19 (47%)
C2H2 Zn finger 531..551 CDD:275368 7/19 (37%)
C2H2 Zn finger 559..579 CDD:275368 7/19 (37%)
C2H2 Zn finger 587..607 CDD:275368 7/19 (37%)
C2H2 Zn finger 615..636 CDD:275368 9/20 (45%)
C2H2 Zn finger 644..664 CDD:275368 8/19 (42%)
C2H2 Zn finger 676..696 CDD:275368 8/19 (42%)
C2H2 Zn finger 704..722 CDD:275368 6/17 (35%)
ZNF544NP_001374339.1 KRAB 68..127 CDD:214630
C2H2 Zn finger 410..428 CDD:275368 6/19 (32%)
zf-H2C2_2 424..445 CDD:463886 9/20 (45%)
C2H2 Zn finger 436..456 CDD:275368 7/19 (37%)
COG5048 460..>753 CDD:227381 129/297 (43%)
C2H2 Zn finger 464..484 CDD:275368 7/19 (37%)
C2H2 Zn finger 492..512 CDD:275368 7/19 (37%)
C2H2 Zn finger 520..540 CDD:275368 8/19 (42%)
C2H2 Zn finger 548..568 CDD:275368 9/19 (47%)
C2H2 Zn finger 576..596 CDD:275368 7/19 (37%)
C2H2 Zn finger 604..624 CDD:275368 7/19 (37%)
C2H2 Zn finger 632..652 CDD:275368 7/19 (37%)
C2H2 Zn finger 660..680 CDD:275368 9/20 (45%)
C2H2 Zn finger 688..708 CDD:275368 8/19 (42%)
C2H2 Zn finger 716..736 CDD:275368 8/19 (42%)
C2H2 Zn finger 744..764 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.

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