DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and ZNF500

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_067678.1 Gene:ZNF500 / 26048 HGNCID:23716 Length:480 Species:Homo sapiens


Alignment Length:143 Identity:58/143 - (40%)
Similarity:79/143 - (55%) Gaps:0/143 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   383 HTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTGETPHRC 447
            |....|:.|..|||.:::..||..|.|:||.|.|::|.:|||.||.:.:|:.|...||||.|:.|
Human   319 HGADKPYTCPECGKGFSKTSHLTKHQRTHTGERPYKCLVCGKGFSDRSNFSTHQRVHTGEKPYPC 383

  Fly   448 DFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTR 512
            ..|.|.|::...|:.|.|.|:||.|:.|:.|.|.|....|...|.|.||||.|:.|..|.:.|.|
Human   384 PECGKRFSQSSSLVIHRRTHSGERPYACTQCGKRFNNSSHFSAHRRTHTGEKPYTCPACGRGFRR 448

  Fly   513 KDHMVNHVRQHTG 525
            ...:..|.|.|.|
Human   449 GTDLHKHQRTHMG 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368
C2H2 Zn finger 251..271 CDD:275368
C2H2 Zn finger 279..299 CDD:275368
COG5048 300..723 CDD:227381 58/143 (41%)
C2H2 Zn finger 307..327 CDD:275368
C2H2 Zn finger 335..355 CDD:275368
C2H2 Zn finger 363..383 CDD:275368 58/143 (41%)
C2H2 Zn finger 391..411 CDD:275368 8/19 (42%)
C2H2 Zn finger 419..439 CDD:275368 8/19 (42%)
C2H2 Zn finger 447..467 CDD:275368 7/19 (37%)
C2H2 Zn finger 475..495 CDD:275368 7/19 (37%)
C2H2 Zn finger 503..523 CDD:275368 6/19 (32%)
C2H2 Zn finger 531..551 CDD:275368
C2H2 Zn finger 559..579 CDD:275368
C2H2 Zn finger 587..607 CDD:275368
C2H2 Zn finger 615..636 CDD:275368
C2H2 Zn finger 644..664 CDD:275368
C2H2 Zn finger 676..696 CDD:275368
C2H2 Zn finger 704..722 CDD:275368
ZNF500NP_067678.1 SCAN 46..151 CDD:128708
SCAN 46..134 CDD:280241
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 161..208
KRAB_A-box 224..>247 CDD:143639
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 242..268
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 284..322 1/2 (50%)
COG5048 <320..459 CDD:227381 55/138 (40%)
zf-C2H2 325..347 CDD:278523 8/21 (38%)
C2H2 Zn finger 327..347 CDD:275368 8/19 (42%)
zf-H2C2_2 339..363 CDD:290200 12/23 (52%)
C2H2 Zn finger 355..375 CDD:275368 8/19 (42%)
zf-H2C2_2 367..392 CDD:290200 11/24 (46%)
C2H2 Zn finger 383..403 CDD:275368 7/19 (37%)
zf-H2C2_2 395..420 CDD:290200 11/24 (46%)
C2H2 Zn finger 411..431 CDD:275368 7/19 (37%)
zf-H2C2_2 423..448 CDD:290200 11/24 (46%)
C2H2 Zn finger 439..459 CDD:275368 6/19 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 453..480 4/9 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23226
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.100

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