DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and ZNF549

DIOPT Version :10

Sequence 1:NP_477243.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:XP_047294519.1 Gene:ZNF549 / 256051 HGNCID:26632 Length:669 Species:Homo sapiens


Alignment Length:577 Identity:198/577 - (34%)
Similarity:281/577 - (48%) Gaps:48/577 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   188 GGIHGVDG----SGNGGNGGGQNVALAPDGTPIATGTHVCDICGKMFQFRYQLIVHRRYHSERKP 248
            |.:||::.    |....:..|.:.|..|...|.....|.|::|..:.:....|..|:.....:||
Human    96 GCLHGIEAEEAPSEQTLSAQGVSQARTPKLGPSIPNAHSCEMCILVMKDILYLSEHQGTLPWQKP 160

  Fly   249 FMCQVCGQGFTTSQDLTRHG----------------------KIHIGGPMFTCIVCFNVFANNTS 291
            :.....|:.|:...:|.:|.                      ||.:...:|.|......|.....
Human   161 YTSVASGKWFSFGSNLQQHQNQDSGEKHIRKEESSALLLNSCKIPLSDNLFPCKDVEKDFPTILG 225

  Fly   292 LERHMKRHSTDKPFACTI----------CQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKE 346
            |.:|...||..: :|...          |::.|..|.|:..|.|.||||..::.:...|:...|.
Human   226 LLQHQTTHSRQE-YAHRSRETFQQRRYKCEQVFNEKVHVTEHQRVHTGEKAYKRREYGKSLNSKY 289

  Fly   347 HMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYM-WHTGQTPHQCDVCGKKYTRKEHLANHMRS 410
            ..|.|.|.|..|.|:.|:||.|||..|:..|.|.. .||.:..:.|..|||..:.|..|..|.|:
Human   290 LFVEHQRTHNAEKPYVCNICGKSFLHKQTLVGHQQRIHTRERSYVCIECGKSLSSKYSLVEHQRT 354

  Fly   411 HTNETPFRCEICGKSFSRKEHFTNH---ILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESP 472
            |..|.|:.|.:|||||..|:.|..|   |  ||||.|:.|..|.|:|......:.|.|.||||..
Human   355 HNGEKPYVCNVCGKSFRHKQTFVGHQQRI--HTGERPYVCMECGKSFIHSYDRIRHQRVHTGEGA 417

  Fly   473 HRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKT 537
            ::||.|.|:|..|:.|::|.|.||||.|::|..|.|||..|..::.|.|.||||.|:.|..|.|:
Human   418 YQCSECGKSFIYKQSLLDHHRIHTGERPYECKECGKAFIHKKRLLEHQRIHTGEKPYVCIICGKS 482

  Fly   538 FTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNN 602
            |.|......|.|.|||:..:.||.|.|.|..|:.|..|.::||.:.|::|..|.|.|..:..|..
Human   483 FIRSSDYMRHQRIHTGERAYECSDCGKAFISKQTLLKHHKIHTRERPYECSECGKGFYLEVKLLQ 547

  Fly   603 HMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKG 667
            |.|.|:.:....||.|.|.|:.::.|:.| .:.|||::|..|..|||.|..:.:|:.||:.|:. 
Human   548 HQRIHTREQLCECNECGKVFSHQKRLLEH-QKVHTGEKPCECSECGKCFRHRTSLIQHQKVHSG- 610

  Fly   668 QEMERPFACEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMN 724
               |||:.|..|.|.||.|..||.|.|.|:||||:.|..|.|||.:|.:|.||.|::
Human   611 ---ERPYNCTACEKAFIYKNKLVEHQRIHTGEKPYECGKCGKAFNKRYSLVRHQKVH 664

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_477243.1 C2H2 Zn finger 223..243 CDD:275368 4/19 (21%)
C2H2 Zn finger 251..271 CDD:275368 5/41 (12%)
C2H2 Zn finger 279..299 CDD:275368 4/19 (21%)
COG5048 300..723 CDD:227381 170/436 (39%)
C2H2 Zn finger 307..327 CDD:275368 6/29 (21%)
C2H2 Zn finger 335..355 CDD:275368 5/19 (26%)
C2H2 Zn finger 363..383 CDD:275368 9/20 (45%)
C2H2 Zn finger 391..411 CDD:275368 8/19 (42%)
C2H2 Zn finger 419..439 CDD:275368 10/22 (45%)
C2H2 Zn finger 447..467 CDD:275368 6/19 (32%)
C2H2 Zn finger 475..495 CDD:275368 9/19 (47%)
C2H2 Zn finger 503..523 CDD:275368 8/19 (42%)
C2H2 Zn finger 531..551 CDD:275368 7/19 (37%)
C2H2 Zn finger 559..579 CDD:275368 8/19 (42%)
C2H2 Zn finger 587..607 CDD:275368 7/19 (37%)
C2H2 Zn finger 615..636 CDD:275368 7/20 (35%)
C2H2 Zn finger 644..664 CDD:275368 8/19 (42%)
C2H2 Zn finger 676..696 CDD:275368 10/19 (53%)
C2H2 Zn finger 704..722 CDD:275368 9/17 (53%)
ZNF549XP_047294519.1 KRAB 56..96 CDD:460171 198/577 (34%)
COG5048 252..632 CDD:227381 152/386 (39%)
C2H2 Zn finger 253..270 CDD:275368 6/16 (38%)
C2H2 Zn finger 278..298 CDD:275368 5/19 (26%)
C2H2 Zn finger 306..327 CDD:275368 9/20 (45%)
C2H2 Zn finger 335..355 CDD:275368 8/19 (42%)
C2H2 Zn finger 363..384 CDD:275368 10/22 (45%)
C2H2 Zn finger 392..412 CDD:275368 6/19 (32%)
C2H2 Zn finger 420..440 CDD:275368 9/19 (47%)
C2H2 Zn finger 448..468 CDD:275368 8/19 (42%)
C2H2 Zn finger 476..496 CDD:275368 7/19 (37%)
C2H2 Zn finger 504..524 CDD:275368 8/19 (42%)
C2H2 Zn finger 532..552 CDD:275368 7/19 (37%)
C2H2 Zn finger 560..580 CDD:275368 7/20 (35%)
C2H2 Zn finger 588..608 CDD:275368 8/19 (42%)
C2H2 Zn finger 616..636 CDD:275368 10/19 (53%)
zf-H2C2_2 629..653 CDD:463886 14/23 (61%)
C2H2 Zn finger 644..664 CDD:275368 10/19 (53%)

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