DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and Zfp53

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_038871.1 Gene:Zfp53 / 24132 MGIID:99200 Length:652 Species:Mus musculus


Alignment Length:496 Identity:181/496 - (36%)
Similarity:267/496 - (53%) Gaps:18/496 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 TGTHVC--DICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQG-----FTTSQDLTRHGKIHIGGP 275
            ||..:|  :.|.|.......|..::|.::..|     :..||     |::...|.:. .|:||..
Mouse   166 TGEELCKSEDCEKSLSLSSNLTENQRLYAANK-----LQSQGEYDDDFSSVYSLMQQ-TIYIGDT 224

  Fly   276 MFTCIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAK 340
            ...|..|...|:..:||..|.:.|:..||:.|::|.|:|.:..:|..|.|.||||.|::|:.|.|
Mouse   225 PHQCEKCRKCFSTASSLTVHKRIHTGKKPYKCSVCGKSFTQCTNLKTHQRLHTGEKPYKCKECGK 289

  Fly   341 TFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLA 405
            :|.:...:.:|.:.||||.|::|..|.|||.....:..|...|..:....|..|||...:..||.
Mouse   290 SFPQLSALKSHQKIHTGERPYKCKECDKSFAHCSSFRRHQKTHRAEEHCSCPECGKVLHQLSHLR 354

  Fly   406 NHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGE 470
            :|.|.||.|.|::|..|.:||:....:..|...|:.:..::|..|.|:|....||..|.|.||||
Mouse   355 SHYRLHTGEKPYKCNECDRSFTYYASYRRHQKTHSLDKFYKCKECGKSFLELSHLKRHYRIHTGE 419

  Fly   471 SPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCT 535
            .|::|..|.|:||....|..|::.||||.||||..|.|:||:..|:..|...||||.|::|..|.
Mouse   420 KPYKCEVCDKSFTVNSTLKTHLKIHTGEKPFKCRECDKSFTKCSHLRRHQSVHTGEKPYRCKECD 484

  Fly   536 KTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHL 600
            |:||....|..|.:.|||:.|::|..|.|:|.::.:|..|.|:|||:.|:.|:.|.|:||:...|
Mouse   485 KSFTECSTLRAHQKIHTGEKPYKCRECDKSFIQRSNLIIHQRVHTGERPYICKECGKSFTKCSTL 549

  Fly   601 NNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHT 665
            ..|.:.|:.:.|:.|..|||.||:..||..| .|.|||:||:.|:.|||||.....|..||:.||
Mouse   550 QIHQKIHTGEKPYKCMECNKSFTQDSHLRTH-QRVHTGERPYICKECGKSFTRCSYLRAHQKIHT 613

  Fly   666 KGQEMERPFACEKCPKNFICKGHLVSHMRSHSGEKPHACTL 706
            .    |:|:.|:.|..:||...:|..|.|.|:|||....|:
Mouse   614 G----EKPYKCKDCDISFIQISNLRRHQRVHTGEKNTIATI 650

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368 5/21 (24%)
C2H2 Zn finger 251..271 CDD:275368 4/24 (17%)
C2H2 Zn finger 279..299 CDD:275368 6/19 (32%)
COG5048 300..723 CDD:227381 159/407 (39%)
C2H2 Zn finger 307..327 CDD:275368 7/19 (37%)
C2H2 Zn finger 335..355 CDD:275368 5/19 (26%)
C2H2 Zn finger 363..383 CDD:275368 6/19 (32%)
C2H2 Zn finger 391..411 CDD:275368 8/19 (42%)
C2H2 Zn finger 419..439 CDD:275368 5/19 (26%)
C2H2 Zn finger 447..467 CDD:275368 8/19 (42%)
C2H2 Zn finger 475..495 CDD:275368 7/19 (37%)
C2H2 Zn finger 503..523 CDD:275368 7/19 (37%)
C2H2 Zn finger 531..551 CDD:275368 7/19 (37%)
C2H2 Zn finger 559..579 CDD:275368 7/19 (37%)
C2H2 Zn finger 587..607 CDD:275368 7/19 (37%)
C2H2 Zn finger 615..636 CDD:275368 10/20 (50%)
C2H2 Zn finger 644..664 CDD:275368 9/19 (47%)
C2H2 Zn finger 676..696 CDD:275368 7/19 (37%)
C2H2 Zn finger 704..722 CDD:275368 1/3 (33%)
Zfp53NP_038871.1 KRAB 53..93 CDD:396083
COG5048 223..627 CDD:227381 156/408 (38%)
C2H2 Zn finger 228..248 CDD:275368 6/19 (32%)
C2H2 Zn finger 256..276 CDD:275368 7/19 (37%)
C2H2 Zn finger 284..304 CDD:275368 5/19 (26%)
C2H2 Zn finger 312..332 CDD:275368 6/19 (32%)
C2H2 Zn finger 340..360 CDD:275368 8/19 (42%)
C2H2 Zn finger 370..388 CDD:275368 4/17 (24%)
C2H2 Zn finger 396..416 CDD:275368 8/19 (42%)
C2H2 Zn finger 424..444 CDD:275368 7/19 (37%)
C2H2 Zn finger 452..472 CDD:275368 7/19 (37%)
C2H2 Zn finger 480..500 CDD:275368 7/19 (37%)
C2H2 Zn finger 508..528 CDD:275368 7/19 (37%)
C2H2 Zn finger 536..556 CDD:275368 7/19 (37%)
C2H2 Zn finger 564..584 CDD:275368 10/20 (50%)
C2H2 Zn finger 592..612 CDD:275368 9/19 (47%)
C2H2 Zn finger 620..640 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 505 1.000 Inparanoid score I1328
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100020
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.950

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