DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and Zfp458

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:XP_017170999.1 Gene:Zfp458 / 238690 MGIID:3040691 Length:790 Species:Mus musculus


Alignment Length:568 Identity:197/568 - (34%)
Similarity:267/568 - (47%) Gaps:41/568 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 HVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNV 285
            :.|..|||.|:.:.....|||.|...|.:.|:.||:.|.....|:.|.:.|.|...:.|.:|...
Mouse   119 YTCKECGKGFEHKKVYQNHRRIHLRVKSYKCEECGKSFRFPSLLSAHKRNHTGQKPYNCEICSKA 183

  Fly   286 FANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVN 350
            |...:.|..|.:.|...||:......||......|..|...||||.|::|:...|.|.....:.|
Mouse   184 FHVPSLLSVHKRIHRVQKPYKSEDYGKTLHCPSLLSQHKIVHTGEKPYQCEDLGKAFRYPSRLSN 248

  Fly   351 HVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNET 415
            |.:.||||.||:|::|.|:|.......||...|||:.|::|:||||.:.....|:.|...||.|.
Mouse   249 HKKIHTGEKPHKCEVCGKAFDYPSRLSNHKRIHTGEKPYKCEVCGKAFHDPSKLSQHKIIHTGEK 313

  Fly   416 PFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMK 480
            |::||:|||:|......:.|.:.||.|...:||.|.|.|.....|..|...||||.|::|..|.|
Mouse   314 PYKCEVCGKTFHYPSILSKHKIIHTKENLCKCDICGKAFHYPLLLSQHKIVHTGEKPYKCEDCGK 378

  Fly   481 TFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLT 545
            .|.....|..|.:.||||.|:||..|.|||.....:..|:..||.|:|:||..|.|.|.....|:
Mouse   379 AFYYPSRLSRHKKIHTGEKPYKCEVCGKAFYYLSILSKHMIVHTEENPYKCEVCGKAFDYPSRLS 443

  Fly   546 NHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSD 610
            ||.:.||.|.||:|..|...|.....|..|..:|||:.|:||:.|.|.|.....|:.|.:.|:.|
Mouse   444 NHKKIHTEDKPHKCEVCGNAFCFSSSLRKHKIIHTGEKPYKCDICGKAFGSPSRLSKHNKIHTED 508

  Fly   611 NPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHT---------- 665
            .|:.|.||.|.|.....|:.| .|.|||::|:.||.|||:|.....|..|:|.||          
Mouse   509 KPYKCEVCGKAFHFPSLLLVH-KRIHTGEKPYKCEVCGKAFYCLSTLSVHKRIHTGEYAYKCEVC 572

  Fly   666 --------------KGQEMERPFACEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGN 716
                          :....|:|:.||.|.:.|.....|..|.|.|||||||.|.:|.|:|.....
Mouse   573 GKAFHCLSTLSVHKRIHTQEKPYKCEVCGQAFHASSKLSHHKRIHSGEKPHKCEICGKSFYYPSR 637

  Fly   717 LKRHM------KMNHPDA---MMPPPPVHPHPQIPAGVLTQVKQEVKP 755
            |.:|.      |..|..|   .:..|..|..|:       .:|...||
Mouse   638 LSKHKVIHTGEKPYHSQASGKTLDYPSRHSKPK-------TIKTGEKP 678

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368 8/19 (42%)
C2H2 Zn finger 251..271 CDD:275368 6/19 (32%)
C2H2 Zn finger 279..299 CDD:275368 5/19 (26%)
COG5048 300..723 CDD:227381 164/452 (36%)
C2H2 Zn finger 307..327 CDD:275368 4/19 (21%)
C2H2 Zn finger 335..355 CDD:275368 5/19 (26%)
C2H2 Zn finger 363..383 CDD:275368 6/19 (32%)
C2H2 Zn finger 391..411 CDD:275368 7/19 (37%)
C2H2 Zn finger 419..439 CDD:275368 7/19 (37%)
C2H2 Zn finger 447..467 CDD:275368 7/19 (37%)
C2H2 Zn finger 475..495 CDD:275368 6/19 (32%)
C2H2 Zn finger 503..523 CDD:275368 6/19 (32%)
C2H2 Zn finger 531..551 CDD:275368 7/19 (37%)
C2H2 Zn finger 559..579 CDD:275368 5/19 (26%)
C2H2 Zn finger 587..607 CDD:275368 6/19 (32%)
C2H2 Zn finger 615..636 CDD:275368 8/20 (40%)
C2H2 Zn finger 644..664 CDD:275368 9/19 (47%)
C2H2 Zn finger 676..696 CDD:275368 7/19 (37%)
C2H2 Zn finger 704..722 CDD:275368 6/23 (26%)
Zfp458XP_017170999.1 KRAB 43..101 CDD:214630
transpos_ISL3 110..>157 CDD:411183 13/37 (35%)
C2H2 Zn finger 121..141 CDD:275368 8/19 (42%)
C2H2 Zn finger 149..169 CDD:275368 6/19 (32%)
C2H2 Zn finger 177..197 CDD:275368 5/19 (26%)
C2H2 Zn finger 209..225 CDD:275368 4/15 (27%)
C2H2 Zn finger 233..253 CDD:275368 5/19 (26%)
COG5048 257..727 CDD:227381 153/430 (36%)
C2H2 Zn finger 261..281 CDD:275368 6/19 (32%)
C2H2 Zn finger 289..309 CDD:275368 7/19 (37%)
C2H2 Zn finger 317..337 CDD:275368 7/19 (37%)
C2H2 Zn finger 345..365 CDD:275368 7/19 (37%)
C2H2 Zn finger 373..393 CDD:275368 6/19 (32%)
C2H2 Zn finger 401..421 CDD:275368 6/19 (32%)
C2H2 Zn finger 429..449 CDD:275368 7/19 (37%)
C2H2 Zn finger 457..477 CDD:275368 5/19 (26%)
C2H2 Zn finger 485..505 CDD:275368 6/19 (32%)
C2H2 Zn finger 513..533 CDD:275368 8/20 (40%)
C2H2 Zn finger 541..561 CDD:275368 9/19 (47%)
C2H2 Zn finger 569..589 CDD:275368 0/19 (0%)
C2H2 Zn finger 597..617 CDD:275368 7/19 (37%)
C2H2 Zn finger 625..645 CDD:275368 6/19 (32%)
C2H2 Zn finger 681..701 CDD:275368
C2H2 Zn finger 709..729 CDD:275368
zf-H2C2_2 721..746 CDD:404364
C2H2 Zn finger 737..757 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 505 1.000 Inparanoid score I1328
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100020
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.950

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