DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment crol and Zfp709

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_663599.3 Gene:Zfp709 / 236193 MGIID:2384299 Length:727 Species:Mus musculus


Alignment Length:535 Identity:189/535 - (35%)
Similarity:267/535 - (49%) Gaps:36/535 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 TGTHVCDICGKMFQFRYQ--LIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCI 280
            |...:| |..:.:.|.|.  |....:.|:.:||:.|:.||:.|:...::.||.:||.|...:.|.
Mouse   193 TREEIC-IDKQHYAFNYPDFLQYVEKVHTGKKPYACKQCGKTFSFLSNIKRHERIHSGEKPYRCN 256

  Fly   281 VCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRK 345
            :|...|..:|:.:.|.:.|:.:||:.||.|.|:|:...::..|.|:||||.|:||..|.|.|:..
Mouse   257 ICDKAFTCSTNFQEHERTHTGEKPYLCTQCGKSFSFLSNIRRHERTHTGEKPYRCNACGKAFSYL 321

  Fly   346 EHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRS 410
            .:..:|.|.||||.|:.|..|.|:||....:..|...|||:.|:.|..|||.::....:..|.|.
Mouse   322 TNFQDHERTHTGEKPYVCTQCGKAFTYYYSFQTHKRCHTGEKPYVCKQCGKAFSYYNSIQTHKRC 386

  Fly   411 HTNETPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRC 475
            ||.|.|:.|::|.|:|:.......|...|:||.||.|..|.|.|.....|..|.|.||||.|::|
Mouse   387 HTGEKPYVCKLCAKAFTTLSSLRYHERIHSGEKPHVCLQCGKGFNSSSTLRIHERTHTGEKPYKC 451

  Fly   476 SYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPH----------- 529
            ..|.|.|:....|..|.|.|:||.|:.|..|.|||||...:..|.|.|.||.|:           
Mouse   452 KKCGKVFSVDSSLRCHERIHSGEKPYVCKQCGKAFTRHTSLRCHERIHCGEKPYICKQCGKGFIS 516

  Fly   530 -----------------KCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVR 577
                             .|..|.|.||....|..|.|.|:|:.|:.|.:|.|.|:.......|.:
Mouse   517 SSNFRKHEWTHSGEKLCVCKLCGKAFTGHSSLQRHERIHSGEKPYVCKHCGKDFSSLSGCQRHEQ 581

  Fly   578 LHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPF 642
            :|||:.|:.|:.|.|.||....|.||.|.||.:.|:.|..|.|.|........| .|.|||::|:
Mouse   582 IHTGEKPYVCKNCGKAFTNPSALRNHERIHSGEKPYVCGQCGKGFISFSKFRIH-ERIHTGEKPY 645

  Fly   643 TCETCGKSFPLKGNLLFHQRSHTKGQEMERPFACEKCPKNFICKGHLVSHMRSHSGEKPHACTLC 707
            .|:.|||:|....:|..|:|.|:.    |:||.|:.|.|:|........|.:.|:||||..|..|
Mouse   646 KCKQCGKAFTGHSSLRRHERIHSG----EKPFVCKHCGKSFYTLSDCQRHEQIHTGEKPFICKQC 706

  Fly   708 SKAFVERGNLKRHMK 722
            .|||....:||.|.|
Mouse   707 GKAFTRSSSLKIHDK 721

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368 5/21 (24%)
C2H2 Zn finger 251..271 CDD:275368 6/19 (32%)
C2H2 Zn finger 279..299 CDD:275368 5/19 (26%)
COG5048 300..723 CDD:227381 165/451 (37%)
C2H2 Zn finger 307..327 CDD:275368 7/19 (37%)
C2H2 Zn finger 335..355 CDD:275368 6/19 (32%)
C2H2 Zn finger 363..383 CDD:275368 6/19 (32%)
C2H2 Zn finger 391..411 CDD:275368 6/19 (32%)
C2H2 Zn finger 419..439 CDD:275368 5/19 (26%)
C2H2 Zn finger 447..467 CDD:275368 7/19 (37%)
C2H2 Zn finger 475..495 CDD:275368 7/19 (37%)
C2H2 Zn finger 503..523 CDD:275368 9/19 (47%)
C2H2 Zn finger 531..551 CDD:275368 8/19 (42%)
C2H2 Zn finger 559..579 CDD:275368 5/19 (26%)
C2H2 Zn finger 587..607 CDD:275368 9/19 (47%)
C2H2 Zn finger 615..636 CDD:275368 6/20 (30%)
C2H2 Zn finger 644..664 CDD:275368 8/19 (42%)
C2H2 Zn finger 676..696 CDD:275368 5/19 (26%)
C2H2 Zn finger 704..722 CDD:275368 8/17 (47%)
Zfp709NP_663599.3 KRAB 4..>44 CDD:214630
KRAB 4..43 CDD:279668
C2H2 Zn finger 227..247 CDD:275368 6/19 (32%)
zf-H2C2_2 239..264 CDD:290200 8/24 (33%)
COG5048 251..693 CDD:227381 157/446 (35%)
C2H2 Zn finger 255..275 CDD:275368 5/19 (26%)
zf-H2C2_2 267..291 CDD:290200 8/23 (35%)
C2H2 Zn finger 283..303 CDD:275368 7/19 (37%)
zf-H2C2_2 295..320 CDD:290200 12/24 (50%)
C2H2 Zn finger 311..331 CDD:275368 6/19 (32%)
zf-H2C2_2 323..348 CDD:290200 11/24 (46%)
C2H2 Zn finger 339..359 CDD:275368 6/19 (32%)
zf-H2C2_2 351..376 CDD:290200 9/24 (38%)
C2H2 Zn finger 367..387 CDD:275368 6/19 (32%)
C2H2 Zn finger 395..415 CDD:275368 5/19 (26%)
C2H2 Zn finger 423..443 CDD:275368 7/19 (37%)
zf-H2C2_2 436..459 CDD:290200 11/22 (50%)
C2H2 Zn finger 451..471 CDD:275368 7/19 (37%)
zf-H2C2_2 463..488 CDD:290200 12/24 (50%)
C2H2 Zn finger 479..499 CDD:275368 9/19 (47%)
C2H2 Zn finger 507..527 CDD:275368 0/19 (0%)
C2H2 Zn finger 535..555 CDD:275368 8/19 (42%)
zf-H2C2_2 547..572 CDD:290200 10/24 (42%)
C2H2 Zn finger 563..583 CDD:275368 5/19 (26%)
zf-H2C2_2 577..600 CDD:290200 9/22 (41%)
C2H2 Zn finger 591..611 CDD:275368 9/19 (47%)
C2H2 Zn finger 619..639 CDD:275368 6/20 (30%)
zf-H2C2_2 632..655 CDD:290200 10/23 (43%)
C2H2 Zn finger 647..667 CDD:275368 8/19 (42%)
zf-H2C2_2 659..684 CDD:290200 11/28 (39%)
C2H2 Zn finger 675..695 CDD:275368 5/19 (26%)
zf-H2C2_2 687..712 CDD:290200 11/24 (46%)
C2H2 Zn finger 703..723 CDD:275368 9/19 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 48 1.000 Domainoid score I11836
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 505 1.000 Inparanoid score I1328
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100020
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.950

Return to query results.
Submit another query.