DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and AI987944

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_898990.1 Gene:AI987944 / 233168 MGIID:2142079 Length:406 Species:Mus musculus


Alignment Length:349 Identity:138/349 - (39%)
Similarity:193/349 - (55%) Gaps:6/349 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   294 RHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGE 358
            ||.:.|:.:||...|.|.|.||.:.|..||.|.||||.........|.|..:.|:..|.|.||.:
Mouse    63 RHERSHTGEKPSVYTQCGKVFAYRSHPQNHDRMHTGEKSHEGIQHGKAFAHQSHLQRHERIHTSK 127

  Fly   359 TPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICG 423
            .|:.|:.|.|:|..:.:...|...|..:.|.:.:.||     :.:|..|.|:|:.:.|:.|..||
Mouse   128 KPYECNQCGKAFAHRSYLRKHKRIHIEEKPDEWNQCG-----QGNLQIHKRTHSAQKPYECNQCG 187

  Fly   424 KSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHL 488
            |:|.|......|...||||.|::||.|.|.||::.||..|.|.||||.|:.|:.|.|.|.....|
Mouse   188 KAFRRHNSLQVHNRTHTGEKPYKCDQCDKAFTQQGHLRIHNRTHTGEKPYECNQCGKAFAVHSTL 252

  Fly   489 VNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTG 553
            ..|.|.||.|||::|..|.|||.|.:.:..|.|.||||.|:||..|.|.|:::.||..|.|.|||
Mouse   253 QIHKRTHTAETPYECNQCGKAFRRHNTLQIHKRTHTGEKPYKCDQCDKAFSQQGHLRIHKRTHTG 317

  Fly   554 DSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVC 618
            :.|::||.|.|.|.|..||..|.|:|||:.|::|..|.|.|::...|..|...|:::.|:.||.|
Mouse   318 EKPYKCSQCGKAFARHSHLLIHERIHTGEKPYRCNQCNKAFSQYGGLQIHKSTHTAEKPYECNEC 382

  Fly   619 NKPFTRKEHLINHMSRCHTGDRPF 642
            .|.|::..:|..| .|.||.::|:
Mouse   383 GKTFSQHSYLRTH-KRTHTREKPY 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368
C2H2 Zn finger 251..271 CDD:275368
C2H2 Zn finger 279..299 CDD:275368 2/4 (50%)
COG5048 300..723 CDD:227381 135/343 (39%)
C2H2 Zn finger 307..327 CDD:275368 9/19 (47%)
C2H2 Zn finger 335..355 CDD:275368 5/19 (26%)
C2H2 Zn finger 363..383 CDD:275368 5/19 (26%)
C2H2 Zn finger 391..411 CDD:275368 5/19 (26%)
C2H2 Zn finger 419..439 CDD:275368 7/19 (37%)
C2H2 Zn finger 447..467 CDD:275368 10/19 (53%)
C2H2 Zn finger 475..495 CDD:275368 7/19 (37%)
C2H2 Zn finger 503..523 CDD:275368 8/19 (42%)
C2H2 Zn finger 531..551 CDD:275368 8/19 (42%)
C2H2 Zn finger 559..579 CDD:275368 10/19 (53%)
C2H2 Zn finger 587..607 CDD:275368 6/19 (32%)
C2H2 Zn finger 615..636 CDD:275368 8/20 (40%)
C2H2 Zn finger 644..664 CDD:275368
C2H2 Zn finger 676..696 CDD:275368
C2H2 Zn finger 704..722 CDD:275368
AI987944NP_898990.1 KRAB 4..>45 CDD:214630
KRAB 4..43 CDD:279668
COG5048 51..405 CDD:227381 137/347 (39%)
C2H2 Zn finger 77..96 CDD:275368 9/18 (50%)
C2H2 Zn finger 108..124 CDD:275368 5/15 (33%)
zf-H2C2_2 116..141 CDD:290200 10/24 (42%)
C2H2 Zn finger 132..152 CDD:275368 5/19 (26%)
zf-H2C2_2 167..192 CDD:290200 10/24 (42%)
C2H2 Zn finger 183..203 CDD:275368 7/19 (37%)
zf-H2C2_2 195..220 CDD:290200 11/24 (46%)
C2H2 Zn finger 211..231 CDD:275368 10/19 (53%)
zf-H2C2_2 223..247 CDD:290200 12/23 (52%)
C2H2 Zn finger 239..259 CDD:275368 7/19 (37%)
C2H2 Zn finger 267..287 CDD:275368 8/19 (42%)
zf-H2C2_2 280..304 CDD:290200 12/23 (52%)
C2H2 Zn finger 295..315 CDD:275368 8/19 (42%)
zf-H2C2_2 307..332 CDD:290200 13/24 (54%)
C2H2 Zn finger 323..343 CDD:275368 10/19 (53%)
zf-H2C2_2 335..360 CDD:290200 12/24 (50%)
C2H2 Zn finger 351..371 CDD:275368 6/19 (32%)
C2H2 Zn finger 379..399 CDD:275368 8/20 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100020
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.900

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