DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment crol and Zfp62

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_001349654.1 Gene:Zfp62 / 22720 MGIID:99662 Length:914 Species:Mus musculus


Alignment Length:513 Identity:202/513 - (39%)
Similarity:268/513 - (52%) Gaps:8/513 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   216 IATG--THVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFT 278
            |.||  .:.||.|||.:.....||.|:..||..|...|..||:.|..|..|.:|.:||.|...:.
Mouse   180 IHTGEKPYKCDECGKAYMSYSSLINHKSTHSGEKNCKCDECGKSFNYSSVLDQHKRIHTGEKPYE 244

  Fly   279 CIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFT 343
            |..|...|.|::.|..|.:.|:.:||:.|..|.|||:....|..|.|.||||.|:.|..|.|.|.
Mouse   245 CGECGKAFRNSSGLRVHKRIHTGEKPYECDTCGKTFSNSSGLRVHKRIHTGEKPYECDECGKAFI 309

  Fly   344 RKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHM 408
            ....::||...|.|:.|::||.|:|||......:.|.:.|||:.|::||.|||.:.....|..|.
Mouse   310 TCRTLLNHKSIHFGDKPYKCDECEKSFNYSSLLIQHKVIHTGEKPYECDECGKAFRNSSGLIVHK 374

  Fly   409 RSHTNETPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPH 473
            |.||.|.|::|:||||:||.......|...|.|:..|.|..|.|:|:....||.|...||||.|:
Mouse   375 RIHTGEKPYKCDICGKAFSYSSGLAVHKSIHPGKKAHECKDCGKSFSYNSLLLQHKTIHTGERPY 439

  Fly   474 RCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTF 538
            .|..|.|||.....|..|.|.||||.|:||..|.||:..:..:.||...|.||.|:||:||.|:|
Mouse   440 VCDVCGKTFRNNSGLKVHRRLHTGEKPYKCDVCGKAYISRSSLKNHKGIHMGEKPYKCSYCEKSF 504

  Fly   539 TRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNH 603
            .....|..|.|.||.:.|..|..|.|.|.....|..|.|:|||:.|:|||.|.|.:.....|.||
Mouse   505 NYSSALEQHKRIHTREKPFGCDECGKAFRNNSGLKVHKRIHTGERPYKCEECGKAYISLSSLINH 569

  Fly   604 MRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQ 668
            ...|..:.|..|:.|.|.|.....|:|| .:.|.|::|:.|:.|.|||.....|..|:|.||:  
Mouse   570 KSVHPGEKPFKCDECEKAFITYRTLLNH-KKIHLGEKPYKCDVCEKSFNYTSLLSQHKRVHTR-- 631

  Fly   669 EMERPFACEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHP 726
              |:||.|::|.|.|.....|..|.|.|:||||:.|.:|.||::...:|..| |..||
Mouse   632 --EKPFECDRCEKVFRNNSSLKVHKRIHTGEKPYECDICGKAYISHSSLINH-KSTHP 686

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368 8/19 (42%)
C2H2 Zn finger 251..271 CDD:275368 7/19 (37%)
C2H2 Zn finger 279..299 CDD:275368 6/19 (32%)
COG5048 300..723 CDD:227381 168/422 (40%)
C2H2 Zn finger 307..327 CDD:275368 8/19 (42%)
C2H2 Zn finger 335..355 CDD:275368 6/19 (32%)
C2H2 Zn finger 363..383 CDD:275368 7/19 (37%)
C2H2 Zn finger 391..411 CDD:275368 8/19 (42%)
C2H2 Zn finger 419..439 CDD:275368 8/19 (42%)
C2H2 Zn finger 447..467 CDD:275368 7/19 (37%)
C2H2 Zn finger 475..495 CDD:275368 8/19 (42%)
C2H2 Zn finger 503..523 CDD:275368 6/19 (32%)
C2H2 Zn finger 531..551 CDD:275368 8/19 (42%)
C2H2 Zn finger 559..579 CDD:275368 7/19 (37%)
C2H2 Zn finger 587..607 CDD:275368 7/19 (37%)
C2H2 Zn finger 615..636 CDD:275368 7/20 (35%)
C2H2 Zn finger 644..664 CDD:275368 8/19 (42%)
C2H2 Zn finger 676..696 CDD:275368 7/19 (37%)
C2H2 Zn finger 704..722 CDD:275368 6/17 (35%)
Zfp62NP_001349654.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..35
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 80..101
COG5048 127..542 CDD:227381 142/361 (39%)
C2H2 Zn finger 133..153 CDD:275368