DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and Zfp60

DIOPT Version :10

Sequence 1:NP_477243.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_033586.2 Gene:Zfp60 / 22718 MGIID:99207 Length:704 Species:Mus musculus


Alignment Length:559 Identity:192/559 - (34%)
Similarity:260/559 - (46%) Gaps:33/559 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   190 IHGVDGSGNGGNGGGQNVALAPDG-------------TPIATGT-----------HVCDICGKMF 230
            :.||..|    ||.|.:|...|..             ..::|.|           :.|..|||.|
Mouse   122 VQGVSVS----NGPGYSVIKEPQNYQEGDANRNITNKKEMSTYTSKTLAHNKEKPYKCKDCGKCF 182

  Fly   231 QFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNTSLERH 295
            ..:..|..|...|:..||:.|:.||:.|...|.|:||.|.|.....|.|.:|...|...|.|:.|
Mouse   183 GCKSNLHQHESIHTGEKPYECKDCGKTFRLPQMLSRHQKSHSDERPFECNICGKSFHLPTLLQYH 247

  Fly   296 MKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETP 360
            ...|:..|||.|..|.|:|.|...|..|...|.|..|::|..|.|.|.|:.:::.|.:.|:.:.|
Mouse   248 KNIHTGLKPFECEECGKSFNRISTLFQHRTIHAGMKPYKCNVCGKAFNRRSNLLQHQKIHSEDRP 312

  Fly   361 HRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKS 425
            ..|.:|.|:||.......|...||.....:|..|||.::...:|..|..:||||.||.|.||||:
Mouse   313 FHCKVCGKAFTVLAQLTRHENIHTEDKSFECKQCGKIFSNGSYLLRHYDTHTNEKPFECNICGKA 377

  Fly   426 FSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVN 490
            |....:.:.|...||.|.|.:|..|...|.||..|..|.|.||...|::|..|.|.|.|:.:...
Mouse   378 FRLHLYLSEHQKTHTDEKPFKCKLCESAFRRKYQLSEHQRIHTDVKPYQCKDCGKFFRRRSNFTE 442

  Fly   491 HIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDS 555
            |...|||:.||:|..|.|.|....|::.|.|.|:.|.|.:|..|.|.|.....|.||...|||.:
Mouse   443 HQSIHTGKKPFECKDCGKVFRLNIHLIRHQRFHSDEKPFECKECGKAFHFSSQLNNHKTSHTGQT 507

  Fly   556 PHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNK 620
            |..|..|.|:|.|...|..|..:|:|..|:||..|.:.|.|:.:|..|.:.||.:.|..|..|.|
Mouse   508 PFECKECGKSFKRVSSLVEHRIIHSGVKPYKCNACGRAFNRRSNLMQHEKIHSDERPFECKDCGK 572

  Fly   621 PFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQEMERPFACEKCPKNFIC 685
            .||....|..|.: .|.|.:.:.||.||.:|.|...|..|||.|..    .:||.|::|.|.|:.
Mouse   573 AFTVLAQLTRHQT-IHNGKKSYECEQCGSAFRLPYQLTQHQRIHYD----VKPFQCKECGKGFVR 632

  Fly   686 KGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMN 724
            ...|..|.|.|:||||..|..|.:||........|.:::
Mouse   633 STGLRIHERIHTGEKPFQCKECGEAFQYHYQFLGHFRIH 671

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_477243.1 C2H2 Zn finger 223..243 CDD:275368 7/19 (37%)
C2H2 Zn finger 251..271 CDD:275368 9/19 (47%)
C2H2 Zn finger 279..299 CDD:275368 6/19 (32%)
COG5048 300..723 CDD:227381 154/422 (36%)
C2H2 Zn finger 307..327 CDD:275368 7/19 (37%)
C2H2 Zn finger 335..355 CDD:275368 6/19 (32%)
C2H2 Zn finger 363..383 CDD:275368 6/19 (32%)
C2H2 Zn finger 391..411 CDD:275368 6/19 (32%)
C2H2 Zn finger 419..439 CDD:275368 7/19 (37%)
C2H2 Zn finger 447..467 CDD:275368 8/19 (42%)
C2H2 Zn finger 475..495 CDD:275368 6/19 (32%)
C2H2 Zn finger 503..523 CDD:275368 7/19 (37%)
C2H2 Zn finger 531..551 CDD:275368 7/19 (37%)
C2H2 Zn finger 559..579 CDD:275368 7/19 (37%)
C2H2 Zn finger 587..607 CDD:275368 6/19 (32%)
C2H2 Zn finger 615..636 CDD:275368 7/20 (35%)
C2H2 Zn finger 644..664 CDD:275368 10/19 (53%)
C2H2 Zn finger 676..696 CDD:275368 7/19 (37%)
C2H2 Zn finger 704..722 CDD:275368 5/17 (29%)
Zfp60NP_033586.2 KRAB 14..75 CDD:214630
C2H2 Zn finger 175..195 CDD:275368 7/19 (37%)
C2H2 Zn finger 203..223 CDD:275368 9/19 (47%)
COG5048 212..640 CDD:227381 156/432 (36%)
C2H2 Zn finger 231..251 CDD:275368 6/19 (32%)
C2H2 Zn finger 259..279 CDD:275368 7/19 (37%)
C2H2 Zn finger 287..307 CDD:275368 6/19 (32%)
C2H2 Zn finger 315..335 CDD:275368 6/19 (32%)
C2H2 Zn finger 343..363 CDD:275368 6/19 (32%)
C2H2 Zn finger 371..391 CDD:275368 7/19 (37%)
C2H2 Zn finger 399..419 CDD:275368 8/19 (42%)
C2H2 Zn finger 427..447 CDD:275368 6/19 (32%)
C2H2 Zn finger 455..475 CDD:275368 7/19 (37%)
C2H2 Zn finger 483..503 CDD:275368 7/19 (37%)
C2H2 Zn finger 511..531 CDD:275368 7/19 (37%)
C2H2 Zn finger 539..559 CDD:275368 6/19 (32%)
C2H2 Zn finger 567..587 CDD:275368 7/20 (35%)
C2H2 Zn finger 595..615 CDD:275368 10/19 (53%)
C2H2 Zn finger 623..643 CDD:275368 7/19 (37%)
zf-H2C2_2 636..658 CDD:463886 10/21 (48%)
C2H2 Zn finger 651..671 CDD:275368 5/19 (26%)
C2H2 Zn finger 679..699 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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