DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and Zfp27

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_001032796.1 Gene:Zfp27 / 22689 MGIID:99174 Length:819 Species:Mus musculus


Alignment Length:572 Identity:212/572 - (37%)
Similarity:289/572 - (50%) Gaps:64/572 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   216 IATGTHV--CDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFT 278
            |.||..:  |..|||.|.:...|.:|::.|:..|...|..||:.||....|..|.|||.|...:.
Mouse   254 IHTGEKLYDCSHCGKGFSYNSDLRIHQKIHTGEKRHGCVDCGKAFTQKSTLRMHQKIHTGERAYV 318

  Fly   279 CIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEH----------------LDN----- 322
            ||.|...|...|.|..|.:.|:.:||:||..|.|.|..|..                ||.     
Mouse   319 CIECGQAFIQKTHLVAHRRIHTGEKPYACDGCGKAFLSKSQLLVHQRIHSRVRPCVSLDRAKPFS 383

  Fly   323 -----------------------------------HFRSHTGETPFRCQYCAKTFTRKEHMVNHV 352
                                               |.|:||||.|::|..|.|.||:|..:..|.
Mouse   384 SAPNLLPRKKVQMREKSSICAECGKAFTYRSELIIHQRTHTGEKPYQCGDCGKAFTQKSALTVHR 448

  Fly   353 RKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPF 417
            |.||||..:.|..|..:|.::.|...|.:.|||:.|:||..|||.:|.|..|..|.|.||.|.|:
Mouse   449 RIHTGEKSYVCVKCGLAFVQRAHLDAHQVIHTGEKPYQCGHCGKFFTSKSQLHVHKRIHTGEKPY 513

  Fly   418 RCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTF 482
            .|..|||:|:.:.:...|...||||..:.|..|.|.||::..|:.|.|.||||.|:.||.|.|.|
Mouse   514 VCSNCGKAFANRSNLITHQKTHTGEKAYVCARCGKAFTQRSDLVTHQRIHTGEKPYGCSTCGKAF 578

  Fly   483 TRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNH 547
            |:|.||..|.:.||||..:.|..|.|||.:|..::.|.:.||||.||.|..|.:.|.||.:...|
Mouse   579 TQKSHLSIHEKIHTGERQYGCRDCGKAFNQKSILIVHQKIHTGEKPHVCAECGRAFIRKSNFITH 643

  Fly   548 VRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNP 612
            .|.|||:.|:.|:.|.|:||.|..|..|..:|||:.|:.|..|.|.|:.:.:|:.|.:.|:.:.|
Mouse   644 QRIHTGEKPYGCTDCGKSFTSKSQLLVHRPIHTGEKPYVCAECGKAFSGRSNLSKHQKTHTGEKP 708

  Fly   613 HCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQEMERPFACE 677
            :.|:.|.|.|.:|..||.| .|.|||::|:.|..|||||..|..|..|||.||.    |:|:.|.
Mouse   709 YACSECGKSFRQKSELITH-HRIHTGEKPYDCGDCGKSFTKKSQLQVHQRIHTG----EKPYRCA 768

  Fly   678 KCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPDAM 729
            :|.|.|..:.:|..|..:|:||||:.|.:|.|.||::..|..|..: |..|:
Mouse   769 ECGKAFTDRSNLNKHQTTHTGEKPYKCVVCGKGFVQKSVLSIHENV-HTSAV 819

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368 7/19 (37%)
C2H2 Zn finger 251..271 CDD:275368 8/19 (42%)
C2H2 Zn finger 279..299 CDD:275368 7/19 (37%)
COG5048 300..723 CDD:227381 179/478 (37%)
C2H2 Zn finger 307..327 CDD:275368 9/75 (12%)
C2H2 Zn finger 335..355 CDD:275368 8/19 (42%)
C2H2 Zn finger 363..383 CDD:275368 5/19 (26%)
C2H2 Zn finger 391..411 CDD:275368 9/19 (47%)
C2H2 Zn finger 419..439 CDD:275368 6/19 (32%)
C2H2 Zn finger 447..467 CDD:275368 8/19 (42%)
C2H2 Zn finger 475..495 CDD:275368 10/19 (53%)
C2H2 Zn finger 503..523 CDD:275368 7/19 (37%)
C2H2 Zn finger 531..551 CDD:275368 7/19 (37%)
C2H2 Zn finger 559..579 CDD:275368 8/19 (42%)
C2H2 Zn finger 587..607 CDD:275368 6/19 (32%)
C2H2 Zn finger 615..636 CDD:275368 9/20 (45%)
C2H2 Zn finger 644..664 CDD:275368 11/19 (58%)
C2H2 Zn finger 676..696 CDD:275368 6/19 (32%)
C2H2 Zn finger 704..722 CDD:275368 7/17 (41%)
Zfp27NP_001032796.1 KRAB 2..37 CDD:366587
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 93..123
C2H2 Zn finger 152..171 CDD:275370
C2H2 Zn finger 179..199 CDD:275368
C2H2 Zn finger 207..227 CDD:275368
COG5048 <212..372 CDD:227381 39/117 (33%)