DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and Zfp160

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_663458.2 Gene:Zfp160 / 224585 MGIID:108187 Length:650 Species:Mus musculus


Alignment Length:581 Identity:217/581 - (37%)
Similarity:309/581 - (53%) Gaps:35/581 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 NGGQQVTVTTTSSSTSSGGSTTSGGTTTTAGEL-----LMPKMEGGIHGVDGSGNGGNGGGQNVA 208
            ||.:..::::.||..||.....||.......|.     |..|                  ||...
Mouse    94 NGNEAKSISSGSSILSSDKILASGDKAPVVHEYDVYSSLRIK------------------GQKAT 140

  Fly   209 LAPDGTPIATGTHVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIG 273
            :  .|.|     :.|..|.|:|.:...|..||:.|:..|.:.|..||:.|.....|..|.:.|.|
Mouse   141 I--KGKP-----YQCKECDKVFSYTSSLAYHRQIHTGEKLYKCLECGKAFFRRSYLLVHERHHTG 198

  Fly   274 GPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYC 338
            ...:.|..|..||:.|:.|:.|.:.|:.:|||.|..|.|.|:.:.:|.:|...|||:.|::|..|
Mouse   199 AKPYKCNECGKVFSQNSHLKSHRRIHTGEKPFKCNHCGKAFSVRSNLTHHQVIHTGDKPYKCNEC 263

  Fly   339 AKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEH 403
            .|.|::...:..|.|.||||.|:||:.|.|.|:...:...|...|||:.|::|..|||.:|:..|
Mouse   264 GKVFSQTSSLTIHRRTHTGEKPYRCNECGKVFSSHSNLNTHQAIHTGEKPYKCSECGKVFTQNSH 328

  Fly   404 LANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHT 468
            ||||.|.||.|.|::|..|||:||.....|.|...||||.|::|:.|.|.||:..||.:|...|:
Mouse   329 LANHWRIHTGEKPYKCNECGKAFSVYSSLTTHQAIHTGEKPYKCNECGKVFTQNSHLASHRGVHS 393

  Fly   469 GESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTY 533
            ||.|::|..|.|.|::..:|..|.|.||||.|:||:.|.|||:.:..::.|...||||.|:|||.
Mouse   394 GEKPYKCEECGKLFSQTSNLARHWRVHTGEKPYKCSECGKAFSVRSSLIAHQVIHTGEKPYKCTE 458

  Fly   534 CTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKE 598
            |.|.|::...|:.|.|.|||:.|:||:.|.|.|....:|..|..:|||..|:||..|.|.||:..
Mouse   459 CGKVFSQTSSLSIHQRIHTGEKPYRCNECGKAFNSHSNLNTHQVIHTGQKPYKCMQCGKVFTQNS 523

  Fly   599 HLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRS 663
            ||.||.|.|:.:.|:.||.|.|.|:....|..|.: .|||::|:.|..|||.|....:|..|:|:
Mouse   524 HLANHQRTHTGEKPYKCNECGKAFSVYSSLTTHQA-IHTGEKPYKCNECGKVFTQNSHLASHRRT 587

  Fly   664 HTKGQEMERPFACEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMN 724
            ||.    |:|:.|.||.|.|..:..|.:|...|:||||:.|:.|.|.|....||..|.:::
Mouse   588 HTG----EKPYQCNKCDKAFSVRSSLTTHQAIHTGEKPYTCSECGKVFSRSSNLTSHQRLH 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368 7/19 (37%)
C2H2 Zn finger 251..271 CDD:275368 6/19 (32%)
C2H2 Zn finger 279..299 CDD:275368 7/19 (37%)
COG5048 300..723 CDD:227381 177/422 (42%)
C2H2 Zn finger 307..327 CDD:275368 6/19 (32%)
C2H2 Zn finger 335..355 CDD:275368 6/19 (32%)
C2H2 Zn finger 363..383 CDD:275368 5/19 (26%)
C2H2 Zn finger 391..411 CDD:275368 11/19 (58%)
C2H2 Zn finger 419..439 CDD:275368 8/19 (42%)
C2H2 Zn finger 447..467 CDD:275368 8/19 (42%)
C2H2 Zn finger 475..495 CDD:275368 7/19 (37%)
C2H2 Zn finger 503..523 CDD:275368 6/19 (32%)
C2H2 Zn finger 531..551 CDD:275368 8/19 (42%)
C2H2 Zn finger 559..579 CDD:275368 6/19 (32%)
C2H2 Zn finger 587..607 CDD:275368 10/19 (53%)
C2H2 Zn finger 615..636 CDD:275368 7/20 (35%)
C2H2 Zn finger 644..664 CDD:275368 8/19 (42%)
C2H2 Zn finger 676..696 CDD:275368 7/19 (37%)
C2H2 Zn finger 704..722 CDD:275368 7/17 (41%)
Zfp160NP_663458.2 KRAB 8..68 CDD:214630
KRAB 8..47 CDD:279668
C2H2 Zn finger 148..168 CDD:275368 7/19 (37%)
C2H2 Zn finger 176..196 CDD:275368 6/19 (32%)
zf-H2C2_2 188..213 CDD:290200 8/24 (33%)
COG5048 200..635 CDD:227381 182/439 (41%)
zf-C2H2 202..224 CDD:278523 7/21 (33%)
C2H2 Zn finger 204..224 CDD:275368 7/19 (37%)
zf-H2C2_2 216..240 CDD:290200 9/23 (39%)
C2H2 Zn finger 232..252 CDD:275368 6/19 (32%)
zf-H2C2_2 244..269 CDD:290200 10/24 (42%)
C2H2 Zn finger 260..280 CDD:275368 6/19 (32%)
zf-H2C2_2 272..297 CDD:290200 12/24 (50%)
C2H2 Zn finger 288..308 CDD:275368 5/19 (26%)
zf-H2C2_2 300..325 CDD:290200 9/24 (38%)
C2H2 Zn finger 316..336 CDD:275368 11/19 (58%)
C2H2 Zn finger 344..364 CDD:275368 8/19 (42%)
zf-H2C2_2 356..381 CDD:290200 11/24 (46%)
C2H2 Zn finger 372..392 CDD:275368 8/19 (42%)
zf-H2C2_2 384..409 CDD:290200 11/24 (46%)
C2H2 Zn finger 400..420 CDD:275368 7/19 (37%)
zf-H2C2_2 412..436 CDD:290200 13/23 (57%)
C2H2 Zn finger 428..448 CDD:275368 6/19 (32%)
zf-H2C2_2 440..465 CDD:290200 12/24 (50%)
C2H2 Zn finger 456..476 CDD:275368 8/19 (42%)
zf-H2C2_2 468..493 CDD:290200 12/24 (50%)
C2H2 Zn finger 484..504 CDD:275368 6/19 (32%)
zf-H2C2_2 496..521 CDD:290200 11/24 (46%)
C2H2 Zn finger 512..532 CDD:275368 10/19 (53%)
zf-H2C2_2 524..548 CDD:290200 11/23 (48%)
C2H2 Zn finger 540..560 CDD:275368 7/20 (35%)
zf-H2C2_2 552..577 CDD:290200 11/25 (44%)
C2H2 Zn finger 568..588 CDD:275368 8/19 (42%)
zf-H2C2_2 580..604 CDD:290200 11/27 (41%)
C2H2 Zn finger 596..616 CDD:275368 7/19 (37%)
zf-H2C2_2 608..633 CDD:290200 11/24 (46%)
C2H2 Zn finger 624..644 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 505 1.000 Inparanoid score I1328
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100020
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.860

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