DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment crol and Zfp595

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_808290.1 Gene:Zfp595 / 218314 MGIID:3040707 Length:625 Species:Mus musculus


Alignment Length:506 Identity:184/506 - (36%)
Similarity:260/506 - (51%) Gaps:13/506 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 CDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFA 287
            |:.|||.|.|...|..|:|.|:..||:.|::..:.|.....|.:|..||.|...:.|.||...|.
Mouse   111 CEECGKSFHFSSLLSEHKRIHTGEKPYKCEIHSKAFHVPSKLFQHRIIHTGEKPYNCEVCGKAFC 175

  Fly   288 NNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHV 352
            .:..|.:|...|....|..|.:|.|.|.....|..|.:.||||.|::|:.|.|.:.....:..|.
Mouse   176 TSLFLSKHKIIHMGKNPCKCEVCGKAFEYPSRLSKHKKIHTGEKPYKCKVCGKAYRSPSSLCEHK 240

  Fly   353 RKHTGETPHRCDICKKSFTRKEHYVN----HYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTN 413
            |.|||..|::|::|.|:|    ||.:    |.:.||.:.|::|:||||.:.....|:||...||.
Mouse   241 RTHTGGKPYKCEVCGKAF----HYPSLLSKHKIIHTEEKPYKCEVCGKAFHYLSRLSNHKTIHTG 301

  Fly   414 ETPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYC 478
            |.|::||:|||:|......:.|...|||:.|::|:.|.|.|.......||.|.||||.|:.|..|
Mouse   302 EKPYKCEVCGKAFHVPSSLSEHKRTHTGKKPYKCEVCGKEFRCPSLFSNHKRIHTGEKPYSCEVC 366

  Fly   479 MKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEH 543
            .|.|........|.|.||||.|:||..|.|||.....:.||.:.|.||.|:||..|.|.|.....
Mouse   367 GKAFHTTTLCSIHKRIHTGEKPYKCEVCGKAFHYSSRLSNHKKIHAGEKPYKCEVCGKAFHYPSI 431

  Fly   544 LTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHS 608
            |:.|...||.|:|::|..|.|.|.....|:||.::||.:.|::|:.|.|.|.....|:.|...|.
Mouse   432 LSKHKTIHTEDNPYKCEVCGKAFDYPSRLSNHKKVHTEEKPYQCDICGKAFHYASLLSKHKIIHI 496

  Fly   609 SDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQEMERP 673
            .:.|:.|.||:|.|.....|.|| .:.|||::|:.||.||..|....:|..|:|.||.    ::|
Mouse   497 GEKPYKCEVCDKAFHYPSRLSNH-KKIHTGEKPYKCEICGNVFRFPSSLSEHKRIHTG----DKP 556

  Fly   674 FACEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMN 724
            :.|:.|.|.|.....|..|...|:||.|:.|.:|.|.|.....|.:|.|::
Mouse   557 YKCQICGKAFHYPSLLSKHKIIHTGENPYKCEVCGKFFNYSSRLYKHKKIH 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368 9/19 (47%)
C2H2 Zn finger 251..271 CDD:275368 4/19 (21%)
C2H2 Zn finger 279..299 CDD:275368 6/19 (32%)
COG5048 300..723 CDD:227381 157/426 (37%)
C2H2 Zn finger 307..327 CDD:275368 6/19 (32%)
C2H2 Zn finger 335..355 CDD:275368 5/19 (26%)
C2H2 Zn finger 363..383 CDD:275368 7/23 (30%)
C2H2 Zn finger 391..411 CDD:275368 8/19 (42%)
C2H2 Zn finger 419..439 CDD:275368 7/19 (37%)
C2H2 Zn finger 447..467 CDD:275368 7/19 (37%)
C2H2 Zn finger 475..495 CDD:275368 6/19 (32%)
C2H2 Zn finger 503..523 CDD:275368 7/19 (37%)
C2H2 Zn finger 531..551 CDD:275368 6/19 (32%)
C2H2 Zn finger 559..579 CDD:275368 7/19 (37%)
C2H2 Zn finger 587..607 CDD:275368 6/19 (32%)
C2H2 Zn finger 615..636 CDD:275368 8/20 (40%)
C2H2 Zn finger 644..664 CDD:275368 8/19 (42%)
C2H2 Zn finger 676..696 CDD:275368 6/19 (32%)
C2H2 Zn finger 704..722 CDD:275368 6/17 (35%)
Zfp595NP_808290.1 KRAB 5..63 CDD:214630
C2H2 Zn finger 83..103 CDD:275368
COG5048 110..493 CDD:227381 142/385 (37%)
C2H2 Zn finger 111..131 CDD:275368 9/19 (47%)
C2H2 Zn finger 139..159 CDD:275368 4/19 (21%)
C2H2 Zn finger 167..187 CDD:275368 6/19 (32%)
C2H2 Zn finger 195..215 CDD:275368 6/19 (32%)
C2H2 Zn finger 223..243 CDD:275368 5/19 (26%)
C2H2 Zn finger 251..271 CDD:275368 7/23 (30%)
C2H2 Zn finger 279..299 CDD:275368 8/19 (42%)
C2H2 Zn finger 307..327 CDD:275368 7/19 (37%)
C2H2 Zn finger 335..355 CDD:275368 7/19 (37%)
C2H2 Zn finger 363..383 CDD:275368 6/19 (32%)
C2H2 Zn finger 391..411 CDD:275368 7/19 (37%)
C2H2 Zn finger 419..439 CDD:275368 6/19 (32%)
C2H2 Zn finger 447..467 CDD:275368 7/19 (37%)
C2H2 Zn finger 475..495 CDD:275368 6/19 (32%)
SFP1 <496..566 CDD:227516 27/74 (36%)
C2H2 Zn finger 503..523 CDD:275368 8/20 (40%)
C2H2 Zn finger 531..551 CDD:275368 8/19 (42%)
COG5048 554..>612 CDD:227381 18/54 (33%)
C2H2 Zn finger 559..579 CDD:275368 6/19 (32%)
C2H2 Zn finger 587..607 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 505 1.000 Inparanoid score I1328
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100020
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.860

Return to query results.
Submit another query.