DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and Zfp180

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_001038951.1 Gene:Zfp180 / 210135 MGIID:1923701 Length:655 Species:Mus musculus


Alignment Length:409 Identity:154/409 - (37%)
Similarity:216/409 - (52%) Gaps:61/409 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   320 LDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHT 384
            |....|:::.|..|.|:||.|:|:...|::.|.|.||||.|::|::|.|.|||..|.|:|...||
Mouse   305 LPQSLRNYSEEKRFECKYCGKSFSWSSHLIAHQRTHTGEKPYKCNLCGKFFTRSSHVVSHQRIHT 369

  Fly   385 GQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDF 449
            |:.|::|::|||.:|::..|..|.|:||.|.|:.|..|||||.:......|...||||.|:.|..
Mouse   370 GEKPYRCNLCGKSFTQRYVLVVHQRTHTGERPYECTQCGKSFRQSYKLIAHQRTHTGEKPYECTQ 434

  Fly   450 CSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKD 514
            |.|:|.:...|:.|.:.|:||.|:.||:|.|:|::...||.|.|.||||.||:|.:|.|:|:...
Mouse   435 CGKSFIQSYKLIAHQKIHSGEKPYECSHCGKSFSQSYKLVAHQRTHTGEKPFECNHCGKSFSWSS 499

  Fly   515 HMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLH 579
            .:|:|.|.||||.|::|..|.|:|.|..||..|.|.|||:.|::|..|.|:|::...|..|.|.|
Mouse   500 QLVSHQRTHTGEKPYECNECGKSFNRSSHLVMHQRTHTGEKPYQCKQCGKSFSQSYVLVVHQRTH 564

  Fly   580 TGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTC 644
            ||:.|::|..|.|||          ||.|....|                   .|.|||::|:.|
Mouse   565 TGEKPYECGQCGKTF----------RQSSCFTQH-------------------QRTHTGEKPYEC 600

  Fly   645 ETCGKSFPLKGNLLFHQRSHTKGQEMERPFACEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSK 709
            ..|||:|.|...|:.|||:||                                ||||:.|..|.|
Mouse   601 NQCGKTFSLSARLIVHQRTHT--------------------------------GEKPYKCGQCGK 633

  Fly   710 AFVERGNLKRHMKMNHPDA 728
            ||:......||...:..||
Mouse   634 AFISSSKRSRHQATHSEDA 652

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368
C2H2 Zn finger 251..271 CDD:275368
C2H2 Zn finger 279..299 CDD:275368
COG5048 300..723 CDD:227381 152/402 (38%)
C2H2 Zn finger 307..327 CDD:275368 2/6 (33%)
C2H2 Zn finger 335..355 CDD:275368 8/19 (42%)
C2H2 Zn finger 363..383 CDD:275368 9/19 (47%)
C2H2 Zn finger 391..411 CDD:275368 8/19 (42%)
C2H2 Zn finger 419..439 CDD:275368 7/19 (37%)
C2H2 Zn finger 447..467 CDD:275368 6/19 (32%)
C2H2 Zn finger 475..495 CDD:275368 9/19 (47%)
C2H2 Zn finger 503..523 CDD:275368 7/19 (37%)
C2H2 Zn finger 531..551 CDD:275368 9/19 (47%)
C2H2 Zn finger 559..579 CDD:275368 7/19 (37%)
C2H2 Zn finger 587..607 CDD:275368 6/19 (32%)
C2H2 Zn finger 615..636 CDD:275368 1/20 (5%)
C2H2 Zn finger 644..664 CDD:275368 10/19 (53%)
C2H2 Zn finger 676..696 CDD:275368 0/19 (0%)
C2H2 Zn finger 704..722 CDD:275368 7/17 (41%)
Zfp180NP_001038951.1 COG5048 297..650 CDD:227381 152/405 (38%)
zf-C2H2 318..340 CDD:278523 9/21 (43%)
C2H2 Zn finger 320..340 CDD:275368 8/19 (42%)
zf-H2C2_2 332..357 CDD:290200 12/24 (50%)
C2H2 Zn finger 348..368 CDD:275368 9/19 (47%)
zf-H2C2_2 360..385 CDD:290200 11/24 (46%)
C2H2 Zn finger 376..396 CDD:275368 8/19 (42%)
zf-H2C2_2 389..413 CDD:290200 13/23 (57%)
C2H2 Zn finger 404..424 CDD:275368 7/19 (37%)
zf-H2C2_2 420..441 CDD:290200 10/20 (50%)
C2H2 Zn finger 432..452 CDD:275368 6/19 (32%)
zf-H2C2_2 448..469 CDD:290200 10/20 (50%)
C2H2 Zn finger 460..480 CDD:275368 9/19 (47%)
zf-H2C2_2 473..496 CDD:290200 13/22 (59%)
C2H2 Zn finger 488..508 CDD:275368 7/19 (37%)
zf-H2C2_2 501..525 CDD:290200 12/23 (52%)
C2H2 Zn finger 516..536 CDD:275368 9/19 (47%)
zf-H2C2_2 528..553 CDD:290200 12/24 (50%)
C2H2 Zn finger 544..564 CDD:275368 7/19 (37%)
zf-H2C2_2 557..581 CDD:290200 12/33 (36%)
C2H2 Zn finger 572..592 CDD:275368 10/48 (21%)
zf-H2C2_2 587..608 CDD:290200 10/39 (26%)
C2H2 Zn finger 600..620 CDD:275368 10/19 (53%)
zf-H2C2_2 613..637 CDD:290200 15/55 (27%)
C2H2 Zn finger 628..648 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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