DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and ZNF449

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_689908.3 Gene:ZNF449 / 203523 HGNCID:21039 Length:518 Species:Homo sapiens


Alignment Length:296 Identity:106/296 - (35%)
Similarity:143/296 - (48%) Gaps:35/296 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   283 FNVFANNTSLERHMKRHSTDKPFACT---------ICQKTFARKEH---------------LDNH 323
            |.:...|.......|:..|..||..|         |.||.:.:.|:               |.:.
Human   226 FEIGIENEEDTSKQKKMETMYPFIVTLEGNALQGPILQKDYVQLENQWETPPEDLQTDLAKLVDQ 290

  Fly   324 FRSHTGETPFRCQYCAKTFTRKEHMVN---HVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTG 385
            .....||||..        :..|..:|   |.:|..||.||||..|.|.|.||.....|...|:|
Human   291 QNPTLGETPEN--------SNLEEPLNPKPHKKKSPGEKPHRCPQCGKCFARKSQLTGHQRIHSG 347

  Fly   386 QTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFC 450
            :.||:|..|||::.|...|..|.|.||.|.|:.|.:|.|.|:|:.|...|...|:.|..::|..|
Human   348 EEPHKCPECGKRFLRSSDLYRHQRLHTGERPYECTVCKKRFTRRSHLIGHQRTHSEEETYKCLEC 412

  Fly   451 SKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDH 515
            .|:|.....|..|::.||||.||||..|.|:|:|...|..|.|.||.|.||||.||.|:|.::..
Human   413 GKSFCHGSSLKRHLKTHTGEKPHRCHNCGKSFSRLTALTLHQRTHTEERPFKCNYCGKSFRQRPS 477

  Fly   516 MVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQH 551
            :|.|:|.||||.|:|||:|:|:|.::..|..|...|
Human   478 LVIHLRIHTGEKPYKCTHCSKSFRQRAGLIMHQVTH 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368
C2H2 Zn finger 251..271 CDD:275368
C2H2 Zn finger 279..299 CDD:275368 3/15 (20%)
COG5048 300..723 CDD:227381 103/279 (37%)
C2H2 Zn finger 307..327 CDD:275368 6/43 (14%)
C2H2 Zn finger 335..355 CDD:275368 3/22 (14%)
C2H2 Zn finger 363..383 CDD:275368 7/19 (37%)
C2H2 Zn finger 391..411 CDD:275368 8/19 (42%)
C2H2 Zn finger 419..439 CDD:275368 7/19 (37%)
C2H2 Zn finger 447..467 CDD:275368 6/19 (32%)
C2H2 Zn finger 475..495 CDD:275368 8/19 (42%)
C2H2 Zn finger 503..523 CDD:275368 8/19 (42%)
C2H2 Zn finger 531..551 CDD:275368 7/19 (37%)
C2H2 Zn finger 559..579 CDD:275368
C2H2 Zn finger 587..607 CDD:275368
C2H2 Zn finger 615..636 CDD:275368
C2H2 Zn finger 644..664 CDD:275368
C2H2 Zn finger 676..696 CDD:275368
C2H2 Zn finger 704..722 CDD:275368
ZNF449NP_689908.3 SCAN 27..134 CDD:322011
SFP1 <235..402 CDD:227516 53/174 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 292..325 12/40 (30%)
COG5048 <321..483 CDD:227381 69/161 (43%)
C2H2 Zn finger 325..345 CDD:275368 7/19 (37%)
C2H2 Zn finger 353..373 CDD:275368 8/19 (42%)
C2H2 Zn finger 381..401 CDD:275368 7/19 (37%)
C2H2 Zn finger 409..429 CDD:275368 6/19 (32%)
C2H2 Zn finger 437..457 CDD:275368 8/19 (42%)
C2H2 Zn finger 465..485 CDD:275368 8/19 (42%)
zf-H2C2_2 477..502 CDD:316026 14/24 (58%)
C2H2 Zn finger 493..513 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23226
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
22.010

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