DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and Zfp184

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_898835.1 Gene:Zfp184 / 193452 MGIID:1922244 Length:737 Species:Mus musculus


Alignment Length:513 Identity:200/513 - (38%)
Similarity:284/513 - (55%) Gaps:13/513 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 THV------CDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFT 278
            ||.      |:.|.|.|.....||.|:|.|:..||:.|..||:||.....||:|.:||.|...:.
Mouse   222 THTGEKPYKCNECNKAFSRSENLINHQRIHTGDKPYKCDQCGKGFIEGPSLTQHQRIHTGEKPYK 286

  Fly   279 CIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFT 343
            |..|...|:..|.|.:|.:.|:.:||:.||.|.|:|:::.|...|.:.||||.||:|:.|.||||
Mouse   287 CDECGKAFSQRTHLVQHQRIHTGEKPYTCTECGKSFSQRGHFMEHQKIHTGEKPFKCEECEKTFT 351

  Fly   344 RKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHM 408
            |..|:..|.:.||||..::|:.|.|:|.....::.|:|.|||:.|::|:.|||.:::..:|..|.
Mouse   352 RSTHLTQHQKIHTGEKTYKCNECGKAFNGPSTFIRHHMIHTGEKPYECNECGKAFSQHSNLTQHQ 416

  Fly   409 RSHTNETPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPH 473
            ::||.|.|:.|..|||:||.......|:..||||.|::|..|.|.|:....|..|.|.||.|.|.
Mouse   417 KTHTGEKPYDCAECGKAFSYWSSLAQHLKIHTGEKPYKCSDCGKAFSYCSSLTQHRRIHTREKPF 481

  Fly   474 RCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTF 538
            .||.|.|.|:...:|..|.:.||.|..::|..|.|||.|...:..|.|.||||.|::|..|.|||
Mouse   482 ECSECGKAFSYLSNLNQHQKTHTQEKAYECKECGKAFIRSSSLAKHERIHTGEKPYQCHECGKTF 546

  Fly   539 TRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNH 603
            :....|..|.:.|||:.|::|:.|.:.|.:|.|||.|.|:|||..|:.|..|.|||.....|..|
Mouse   547 SYGSSLIQHKKIHTGERPYKCNECGRAFNQKIHLTQHKRIHTGAKPYACPKCGKTFRHCSSLAQH 611

  Fly   604 MRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQ 668
            .:.|:.:.|:.||.|.|.|::...|..| .|.|||::|:.|..|.|.|....:|..|:.:||.  
Mouse   612 QKTHTEEKPYQCNKCEKTFSQNSRLTQH-QRIHTGEKPYKCSECDKCFTGSVHLTEHRSTHTG-- 673

  Fly   669 EMERPFACEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHP 726
              |:|:..| ||:.|....:|..|.:.|||||...|..|.|||.....|.:|.:: ||
Mouse   674 --EKPYNSE-CPQTFSQSTYLTQHQKIHSGEKLLGCEDCEKAFQCHSALTKHQRL-HP 727

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368 8/19 (42%)
C2H2 Zn finger 251..271 CDD:275368 8/19 (42%)
C2H2 Zn finger 279..299 CDD:275368 6/19 (32%)
COG5048 300..723 CDD:227381 167/422 (40%)
C2H2 Zn finger 307..327 CDD:275368 7/19 (37%)
C2H2 Zn finger 335..355 CDD:275368 9/19 (47%)
C2H2 Zn finger 363..383 CDD:275368 6/19 (32%)
C2H2 Zn finger 391..411 CDD:275368 6/19 (32%)
C2H2 Zn finger 419..439 CDD:275368 7/19 (37%)
C2H2 Zn finger 447..467 CDD:275368 7/19 (37%)
C2H2 Zn finger 475..495 CDD:275368 7/19 (37%)
C2H2 Zn finger 503..523 CDD:275368 8/19 (42%)
C2H2 Zn finger 531..551 CDD:275368 7/19 (37%)
C2H2 Zn finger 559..579 CDD:275368 9/19 (47%)
C2H2 Zn finger 587..607 CDD:275368 7/19 (37%)
C2H2 Zn finger 615..636 CDD:275368 8/20 (40%)
C2H2 Zn finger 644..664 CDD:275368 6/19 (32%)
C2H2 Zn finger 676..696 CDD:275368 6/19 (32%)
C2H2 Zn finger 704..722 CDD:275368 7/17 (41%)
Zfp184NP_898835.1 KRAB 28..88 CDD:214630
COG5048 163..634 CDD:227381 163/411 (40%)