DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment crol and ZNF676

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_001001411.2 Gene:ZNF676 / 163223 HGNCID:20429 Length:588 Species:Homo sapiens


Alignment Length:530 Identity:182/530 - (34%)
Similarity:249/530 - (46%) Gaps:44/530 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   228 KMFQFRYQLIVHRRYH---SERKPFMCQVCGQGFT-TSQDL-TRHGKIHIGGPMFTCIVCFNVFA 287
            ||...||....|...|   |......|.|..:|:. .:|.| |...|:      |.|....|||.
Human    65 KMILRRYDKCGHENLHLKISCTNVDECNVHKEGYNKLNQSLTTTQSKV------FQCGKYANVFH 123

  Fly   288 NNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFR--------------------------- 325
            ..::..||..||:.:|...|....::|....||..|.|                           
Human   124 KCSNSNRHKIRHTGEKGLKCKEYVRSFCMLSHLSQHERIYTRENSYKCEENGKAFNWSSTLTYYK 188

  Fly   326 -SHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPH 389
             .||||.|::|:.|.|.|::...:..|...||||.|::|:.|.|:|.|......|.:.|||:.|:
Human   189 SIHTGEKPYKCEECGKAFSKFSILTKHKVIHTGEKPYKCEECGKAFNRSSILTKHKIIHTGEKPY 253

  Fly   390 QCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTF 454
            :|:.|||.::....|..|...|..|.|::||.|||:.:.......|...||||.|::|:.|.|.|
Human   254 KCEECGKGFSSVSTLNTHKAIHAEEKPYKCEECGKASNSSSKLMEHKRIHTGEKPYKCEECGKAF 318

  Fly   455 TRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNH 519
            :....|..|.|.|.||.|::|..|.|.|.|...|..|...||||.|:||..|.|||::...:..|
Human   319 SWSSSLTEHKRIHAGEKPYKCEECGKAFNRSSILTKHKIIHTGEKPYKCEGCGKAFSKVSTLNTH 383

  Fly   520 VRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSP 584
            ...|..|.|:||..|.|.......|..|.|.|||:.|::|..|.|.|:....||.|.|:|.|:.|
Human   384 KAIHAEEKPYKCEECGKASNSSSKLMEHKRIHTGEKPYKCEECGKAFSWSSSLTEHKRIHAGEKP 448

  Fly   585 HKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGK 649
            :|||.|.|.||.......|.|.|:::.|:.|..|.|.|:....|..| ...|||::.:.||.|||
Human   449 YKCEECGKAFTWSSSFTKHKRIHAAEKPYKCEECGKGFSTFSILTKH-KIIHTGEKRYKCEECGK 512

  Fly   650 SFPLKGNLLFHQRSHTKGQEMERPFACEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVER 714
            :|.....|..|:..||.    |:|:.||:|.|.|.....|..|.|.|:||||:.|..|.|||...
Human   513 AFSWSSILTEHKIIHTG----EKPYKCEECGKAFSRSSSLTRHKRIHTGEKPYKCEECGKAFKSS 573

  Fly   715 GNLKRHMKMN 724
            ..:..|.|::
Human   574 STVSYHKKIH 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368 5/14 (36%)
C2H2 Zn finger 251..271 CDD:275368 7/21 (33%)
C2H2 Zn finger 279..299 CDD:275368 6/19 (32%)
COG5048 300..723 CDD:227381 158/450 (35%)
C2H2 Zn finger 307..327 CDD:275368 6/47 (13%)
C2H2 Zn finger 335..355 CDD:275368 5/19 (26%)
C2H2 Zn finger 363..383 CDD:275368 6/19 (32%)
C2H2 Zn finger 391..411 CDD:275368 6/19 (32%)
C2H2 Zn finger 419..439 CDD:275368 6/19 (32%)
C2H2 Zn finger 447..467 CDD:275368 7/19 (37%)
C2H2 Zn finger 475..495 CDD:275368 7/19 (37%)
C2H2 Zn finger 503..523 CDD:275368 6/19 (32%)
C2H2 Zn finger 531..551 CDD:275368 6/19 (32%)
C2H2 Zn finger 559..579 CDD:275368 8/19 (42%)
C2H2 Zn finger 587..607 CDD:275368 8/19 (42%)
C2H2 Zn finger 615..636 CDD:275368 6/20 (30%)
C2H2 Zn finger 644..664 CDD:275368 8/19 (42%)
C2H2 Zn finger 676..696 CDD:275368 8/19 (42%)
C2H2 Zn finger 704..722 CDD:275368 6/17 (35%)
ZNF676NP_001001411.2 KRAB <1..32 CDD:214630
C2H2 Zn finger 114..135 CDD:275370 6/20 (30%)
C2H2 Zn finger 143..163 CDD:275368 6/19 (32%)
C2H2 Zn finger 171..191 CDD:275368 0/19 (0%)
COG5048 195..580 CDD:227381 146/389 (38%)
C2H2 Zn finger 199..219 CDD:275368 5/19 (26%)
zf-H2C2_2 212..236 CDD:290200 10/23 (43%)
C2H2 Zn finger 227..247 CDD:275368 6/19 (32%)
zf-H2C2_2 240..264 CDD:290200 9/23 (39%)
C2H2 Zn finger 255..275 CDD:275368 6/19 (32%)
C2H2 Zn finger 283..303 CDD:275368 6/19 (32%)
zf-H2C2_2 296..319 CDD:290200 9/22 (41%)
C2H2 Zn finger 311..331 CDD:275368 7/19 (37%)
zf-H2C2_2 323..348 CDD:290200 11/24 (46%)
C2H2 Zn finger 339..359 CDD:275368 7/19 (37%)
zf-H2C2_2 352..375 CDD:290200 12/22 (55%)
C2H2 Zn finger 367..387 CDD:275368 6/19 (32%)
C2H2 Zn finger 395..415 CDD:275368 6/19 (32%)
zf-H2C2_2 408..431 CDD:290200 10/22 (45%)
C2H2 Zn finger 423..443 CDD:275368 8/19 (42%)
zf-H2C2_2 435..459 CDD:290200 12/23 (52%)
C2H2 Zn finger 451..471 CDD:275368 8/19 (42%)
C2H2 Zn finger 479..499 CDD:275368 6/20 (30%)
zf-H2C2_2 492..515 CDD:290200 10/23 (43%)
C2H2 Zn finger 507..527 CDD:275368 8/19 (42%)
zf-H2C2_2 520..544 CDD:290200 11/27 (41%)
C2H2 Zn finger 535..555 CDD:275368 8/19 (42%)
zf-H2C2_2 547..572 CDD:290200 13/24 (54%)
C2H2 Zn finger 563..583 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 499 1.000 Inparanoid score I1378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100020
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.950

Return to query results.
Submit another query.