DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment crol and ZNF383

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_001332876.1 Gene:ZNF383 / 163087 HGNCID:18609 Length:475 Species:Homo sapiens


Alignment Length:352 Identity:133/352 - (37%)
Similarity:194/352 - (55%) Gaps:5/352 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   317 KEHLDNHF---RSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVN 378
            :.||....   ..|..:..|..:| ..||.::..:..|...:..:.|:.|..|.|:|::...::.
Human   124 RSHLAKQLGYPNGHFSQEIFTPEY-MPTFIQQTFLTLHQIINNEDRPYECKKCGKAFSQNSQFIQ 187

  Fly   379 HYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTGET 443
            |...|.|:..::|..|||.::...|:..|::.||.|.||.|:.|||:||...:.:.|...|||:.
Human   188 HQRIHIGEKSYECKECGKFFSCGSHVTRHLKIHTGEKPFECKECGKAFSCSSYLSQHQRIHTGKK 252

  Fly   444 PHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTK 508
            |:.|..|.|.|:...:|::|.|.||||.|:.|..|.|.||:...|..|.|.||||.|::|..|.|
Human   253 PYECKECGKAFSYCSNLIDHQRIHTGEKPYECKVCGKAFTKSSQLFQHARIHTGEKPYECKECGK 317

  Fly   509 AFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLT 573
            |||:...:|.|.|.||||.|::|..|.|.|:....||||.|.|||:.|:.|..|.|.||:...|.
Human   318 AFTQSSKLVQHQRIHTGEKPYECKECGKAFSSGSALTNHQRIHTGEKPYDCKECGKAFTQSSQLR 382

  Fly   574 NHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTG 638
            .|.|:|.|:.|.:|..|.|.||:...|..|.|.|:.:.|:.||.|.|.|.:..:|..|: |.|||
Human   383 QHQRIHAGEKPFECLECGKAFTQNSQLFQHQRIHTDEKPYECNECGKAFNKCSNLTRHL-RIHTG 446

  Fly   639 DRPFTCETCGKSFPLKGNLLFHQRSHT 665
            ::|:.|:.|||:|....:|:.||..||
Human   447 EKPYNCKECGKAFSSGSDLIRHQGIHT 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368
C2H2 Zn finger 251..271 CDD:275368
C2H2 Zn finger 279..299 CDD:275368
COG5048 300..723 CDD:227381 133/352 (38%)
C2H2 Zn finger 307..327 CDD:275368 2/12 (17%)
C2H2 Zn finger 335..355 CDD:275368 4/19 (21%)
C2H2 Zn finger 363..383 CDD:275368 5/19 (26%)
C2H2 Zn finger 391..411 CDD:275368 6/19 (32%)
C2H2 Zn finger 419..439 CDD:275368 7/19 (37%)
C2H2 Zn finger 447..467 CDD:275368 7/19 (37%)
C2H2 Zn finger 475..495 CDD:275368 8/19 (42%)
C2H2 Zn finger 503..523 CDD:275368 9/19 (47%)
C2H2 Zn finger 531..551 CDD:275368 9/19 (47%)
C2H2 Zn finger 559..579 CDD:275368 8/19 (42%)
C2H2 Zn finger 587..607 CDD:275368 8/19 (42%)
C2H2 Zn finger 615..636 CDD:275368 8/20 (40%)
C2H2 Zn finger 644..664 CDD:275368 8/19 (42%)
C2H2 Zn finger 676..696 CDD:275368
C2H2 Zn finger 704..722 CDD:275368
ZNF383NP_001332876.1 KRAB 6..66 CDD:214630
zf-C2H2 170..192 CDD:395048 5/21 (24%)
C2H2 Zn finger 172..192 CDD:275368 5/19 (26%)
zf-H2C2_2 187..209 CDD:404364 7/21 (33%)
C2H2 Zn finger 200..220 CDD:275368 6/19 (32%)
zf-H2C2_2 212..237 CDD:404364 12/24 (50%)
C2H2 Zn finger 228..248 CDD:275368 7/19 (37%)
COG5048 <231..475 CDD:227381 105/244 (43%)
C2H2 Zn finger 256..276 CDD:275368 7/19 (37%)
C2H2 Zn finger 284..304 CDD:275368 8/19 (42%)
C2H2 Zn finger 312..332 CDD:275368 9/19 (47%)
C2H2 Zn finger 340..360 CDD:275368 9/19 (47%)
C2H2 Zn finger 368..388 CDD:275368 8/19 (42%)
C2H2 Zn finger 396..416 CDD:275368 8/19 (42%)
C2H2 Zn finger 424..444 CDD:275368 8/20 (40%)
C2H2 Zn finger 452..472 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.