DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and ZNF600

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_001308795.1 Gene:ZNF600 / 162966 HGNCID:30951 Length:791 Species:Homo sapiens


Alignment Length:498 Identity:194/498 - (38%)
Similarity:283/498 - (56%) Gaps:5/498 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 CDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFA 287
            ||:|||:|..:..|..|.|.|:..||:.|..||:.|:....||.|.::|.......|..|..:|.
Human   261 CDVCGKLFNHKQYLTCHCRCHTGEKPYKCNECGKSFSQVSSLTCHRRLHTAVKSHKCNECGKIFG 325

  Fly   288 NNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHV 352
            .|::|..|...|:.:||:.|..|.|.|.::.:|..|.|.||||.|::|:.|.|.|:||..:.:|.
Human   326 QNSALVIHKAIHTGEKPYKCNECDKAFNQQSNLARHRRIHTGEKPYKCEECDKVFSRKSTLESHK 390

  Fly   353 RKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPF 417
            |.||||.|::|.:|..:||.......|...|||:..::|:.|||.::.|..|..|.|.|..|..:
Human   391 RIHTGEKPYKCKVCDTAFTWNSQLARHKRIHTGEKTYKCNECGKTFSHKSSLVCHHRLHGGEKSY 455

  Fly   418 RCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTF 482
            :|::|.|:|:...|...|...|:|..|::|:.|.|||.:...||.|...||||.|::...|.|.|
Human   456 KCKVCDKAFAWNSHLVRHTRIHSGGKPYKCNECGKTFGQNSDLLIHKSIHTGEQPYKYEECEKVF 520

  Fly   483 TRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNH 547
            :....|..|...||||.|:||..|.|||....::..|.|.|:||.|:||..|:|||..:.:|.:|
Human   521 SCGSTLETHKIIHTGEKPYKCKVCDKAFACHSYLAKHTRIHSGEKPYKCNECSKTFRLRSYLASH 585

  Fly   548 VRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNP 612
            .|.|:|:.|::|:.|.|||:::.:|..|.|||:|:.|:||..|.|||:.|..|.:|.|.|:.:..
Human   586 RRVHSGEKPYKCNECSKTFSQRSYLHCHRRLHSGEKPYKCNECGKTFSHKPSLVHHRRLHTGEKS 650

  Fly   613 HCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQEMERPFACE 677
            :.|.||:|.|.|..:|..| :|.||.::|:.|..|||:|..:..|..|.|.|..    |:.:.||
Human   651 YKCTVCDKAFVRNSYLARH-TRIHTAEKPYKCNECGKAFNQQSQLSLHHRIHAG----EKLYKCE 710

  Fly   678 KCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRH 720
            .|.|.|..|.||..|.|.|.|:||:.|.:|.|.|....:||:|
Human   711 TCDKVFSRKSHLKRHRRIHPGKKPYKCKVCDKTFGSDSHLKQH 753

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368 9/19 (47%)
C2H2 Zn finger 251..271 CDD:275368 7/19 (37%)
C2H2 Zn finger 279..299 CDD:275368 6/19 (32%)
COG5048 300..723 CDD:227381 167/421 (40%)
C2H2 Zn finger 307..327 CDD:275368 7/19 (37%)
C2H2 Zn finger 335..355 CDD:275368 8/19 (42%)
C2H2 Zn finger 363..383 CDD:275368 5/19 (26%)
C2H2 Zn finger 391..411 CDD:275368 8/19 (42%)
C2H2 Zn finger 419..439 CDD:275368 6/19 (32%)
C2H2 Zn finger 447..467 CDD:275368 8/19 (42%)
C2H2 Zn finger 475..495 CDD:275368 5/19 (26%)
C2H2 Zn finger 503..523 CDD:275368 7/19 (37%)
C2H2 Zn finger 531..551 CDD:275368 8/19 (42%)
C2H2 Zn finger 559..579 CDD:275368 8/19 (42%)
C2H2 Zn finger 587..607 CDD:275368 9/19 (47%)
C2H2 Zn finger 615..636 CDD:275368 9/20 (45%)
C2H2 Zn finger 644..664 CDD:275368 8/19 (42%)
C2H2 Zn finger 676..696 CDD:275368 10/19 (53%)
C2H2 Zn finger 704..722 CDD:275368 7/17 (41%)
ZNF600NP_001308795.1 KRAB 24..71 CDD:214630
KRAB 24..60 CDD:279668
COG5048 <154..503 CDD:227381 89/241 (37%)
C2H2 Zn finger 233..253 CDD:275368
C2H2 Zn finger 261..281 CDD:275368 9/19 (47%)
zf-H2C2_2 273..298 CDD:290200 10/24 (42%)
C2H2 Zn finger 289..309 CDD:275368 7/19 (37%)
C2H2 Zn finger 317..337 CDD:275368 6/19 (32%)
zf-H2C2_2 329..354 CDD:290200 9/24 (38%)
COG5048 341..748 CDD:227381 164/411 (40%)
C2H2 Zn finger 345..365 CDD:275368 7/19 (37%)
zf-H2C2_2 357..382 CDD:290200 12/24 (50%)
C2H2 Zn finger 373..393 CDD:275368 8/19 (42%)
zf-H2C2_2 386..409 CDD:290200 9/22 (41%)
C2H2 Zn finger 401..421 CDD:275368 5/19 (26%)
zf-H2C2_2 414..438 CDD:290200 8/23 (35%)
C2H2 Zn finger 429..449 CDD:275368 8/19 (42%)
C2H2 Zn finger 457..477 CDD:275368 6/19 (32%)
C2H2 Zn finger 485..505 CDD:275368 8/19 (42%)
C2H2 Zn finger 513..533 CDD:275368 5/19 (26%)
zf-H2C2_2 526..550 CDD:290200 13/23 (57%)
C2H2 Zn finger 541..561 CDD:275368 7/19 (37%)
C2H2 Zn finger 569..589 CDD:275368 8/19 (42%)
zf-H2C2_2 581..606 CDD:290200 11/24 (46%)
C2H2 Zn finger 597..617 CDD:275368 8/19 (42%)
C2H2 Zn finger 625..645 CDD:275368 9/19 (47%)
C2H2 Zn finger 653..673 CDD:275368 9/20 (45%)
zf-H2C2_2 665..690 CDD:290200 11/25 (44%)
C2H2 Zn finger 681..701 CDD:275368 8/19 (42%)
zf-C2H2 707..729 CDD:278523 10/21 (48%)
C2H2 Zn finger 709..729 CDD:275368 10/19 (53%)
zf-H2C2_2 721..744 CDD:290200 11/22 (50%)
C2H2 Zn finger 737..757 CDD:275368 7/17 (41%)
zf-H2C2_2 749..773 CDD:290200 3/5 (60%)
C2H2 Zn finger 765..785 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 47 1.000 Domainoid score I11996
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 499 1.000 Inparanoid score I1378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100020
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.860

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