DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and ZNF836

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_001096127.1 Gene:ZNF836 / 162962 HGNCID:34333 Length:936 Species:Homo sapiens


Alignment Length:572 Identity:210/572 - (36%)
Similarity:304/572 - (53%) Gaps:63/572 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   216 IATG--THVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFT 278
            |.||  .:.||||||:|:....|:.|:|.|:..||:.|.:||:.|:.|.:|..|..:|.|...:.
Human   351 IHTGEKPYQCDICGKVFRQNSNLVNHQRIHTGEKPYKCNICGKSFSQSSNLATHQTVHSGNKPYK 415

  Fly   279 CIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFT 343
            |..|...|..::||..|...|:.:||:.|.:|.|.|:::..|..|.||||||.|::|..|.|.|:
Human   416 CDECGKTFKRSSSLTTHQIIHTGEKPYTCDVCDKVFSQRSQLARHQRSHTGEKPYKCNECGKVFS 480

  Fly   344 RKEHMVNHVRKHTGETPHRCDICKKSF-------------TRKEHY---------------VNHY 380
            :..|:|.|.|.||||.|::||.|.|:|             ||::.|               |.|.
Human   481 QTSHLVGHRRIHTGEKPYKCDKCGKAFKQGSLLTRHKIIHTREKRYQCGECGKVFSENSCLVRHL 545

  Fly   381 MWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTGETPH 445
            ..|||:.|::|:||||.:....:|:.|.|.||.|.||:|..||..|........|:..|||:.|:
Human   546 RIHTGEQPYKCNVCGKVFNYSGNLSIHKRIHTGEKPFQCNECGTVFRNYSCLARHLRIHTGQKPY 610

  Fly   446 RCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAF 510
            :|:.|.|.|....:|.||.|.||||.|.:|:.|.|.|:....|..|.:.||||.|:||..|.||:
Human   611 KCNVCGKVFNDSGNLSNHKRIHTGEKPFQCNECGKVFSYYSCLARHRKIHTGEKPYKCNDCGKAY 675

  Fly   511 TRKDHMVNHV----------------------------RQHTGESPHKCTYCTKTFTRKEHLTNH 547
            |::..:..|:                            |..|||.||||::|.:||:....||.|
Human   676 TQRSSLTKHLIIHTGEKPYNCNEFGGAFIQSSKLARYHRNPTGEKPHKCSHCGRTFSHITGLTYH 740

  Fly   548 VRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNP 612
            .|:|||:.|::|..|.:.|....:|..|.|:|||:.|:||..|.|.|..:..|..|...|:.:.|
Human   741 QRRHTGEMPYKCIECGQVFNSTSNLARHRRIHTGEKPYKCNECGKVFRHQSTLARHRSIHTGEKP 805

  Fly   613 HCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQEMERPFACE 677
            :.||.|.|.|..:..|:|| .:.||||:|:.|..|||:|..:..|::|||:||.    |:|:.|.
Human   806 YVCNECGKAFRVRSILVNH-QKMHTGDKPYKCNECGKAFIERSKLVYHQRNHTG----EKPYKCI 865

  Fly   678 KCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPDAM 729
            :|.|.|.....|..|...||||||:.|..|.|:|:.|..|.:|...:..:::
Human   866 ECGKAFGRFSCLNKHQMIHSGEKPYKCNECGKSFISRSGLTKHQTKHTAESL 917

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368 10/19 (53%)
C2H2 Zn finger 251..271 CDD:275368 7/19 (37%)
C2H2 Zn finger 279..299 CDD:275368 6/19 (32%)
COG5048 300..723 CDD:227381 178/478 (37%)
C2H2 Zn finger 307..327 CDD:275368 7/19 (37%)
C2H2 Zn finger 335..355 CDD:275368 8/19 (42%)
C2H2 Zn finger 363..383 CDD:275368 10/47 (21%)
C2H2 Zn finger 391..411 CDD:275368 8/19 (42%)
C2H2 Zn finger 419..439 CDD:275368 5/19 (26%)
C2H2 Zn finger 447..467 CDD:275368 8/19 (42%)
C2H2 Zn finger 475..495 CDD:275368 6/19 (32%)
C2H2 Zn finger 503..523 CDD:275368 7/47 (15%)
C2H2 Zn finger 531..551 CDD:275368 8/19 (42%)
C2H2 Zn finger 559..579 CDD:275368 6/19 (32%)
C2H2 Zn finger 587..607 CDD:275368 6/19 (32%)
C2H2 Zn finger 615..636 CDD:275368 8/20 (40%)
C2H2 Zn finger 644..664 CDD:275368 9/19 (47%)
C2H2 Zn finger 676..696 CDD:275368 6/19 (32%)
C2H2 Zn finger 704..722 CDD:275368 7/17 (41%)
ZNF836NP_001096127.1 KRAB 8..>48 CDD:214630
KRAB 8..47 CDD:279668
C2H2 Zn finger 220..240 CDD:275368
C2H2 Zn finger 248..268 CDD:275368
COG5048 272..648 CDD:227381 112/296 (38%)
C2H2 Zn finger 276..296 CDD:275368
zf-H2C2_2 288..313 CDD:290200
C2H2 Zn finger 304..324 CDD:275368
zf-H2C2_2 316..341 CDD:290200