DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and ZNF480

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_653285.2 Gene:ZNF480 / 147657 HGNCID:23305 Length:535 Species:Homo sapiens


Alignment Length:355 Identity:146/355 - (41%)
Similarity:202/355 - (56%) Gaps:1/355 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   284 NVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHM 348
            |.|.:::.|.:..|.|..:||:.|....|.|.....|..|...||.|.|::|..|.|.|:|..|:
Human   182 NDFDDSSFLPQEQKVHLREKPYECNEHSKVFRVSSSLTKHQVIHTVEKPYKCNSCGKVFSRNSHL 246

  Fly   349 VNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTN 413
            ..|.|.||||.|::|::|.|.|:...::..|...||.:.|::|:.|||.::...:||.|.|.|..
Human   247 AEHCRIHTGEKPYKCNVCGKVFSYNSNFARHQRIHTREKPYECNECGKVFSNNSYLARHQRIHAE 311

  Fly   414 ETPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYC 478
            |.|::|..|||.||.|....||...:|||.|::||.|.|.|.|...|:.|.:.||||.|::|:.|
Human   312 EKPYKCNECGKGFSHKSSLANHWRIYTGEKPYKCDECGKAFYRIALLVRHQKIHTGEKPYKCNEC 376

  Fly   479 MKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEH 543
            .|.|.:..||..|.|.||||.|:||..|.|.|.:..::..|.|.||||.|:||..|.|.|:....
Human   377 GKVFIQNSHLAQHWRIHTGEKPYKCNECGKVFNQLSNLARHRRIHTGEKPYKCNECGKAFSEYSG 441

  Fly   544 LTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHS 608
            |:.|:..|||:.|::||.|.|.|..|..||||.|:|||:.|:||..|.|.|.|..||..|.:.|:
Human   442 LSAHLVIHTGEKPYKCSECGKAFRHKLSLTNHQRIHTGERPYKCNECGKVFNRIAHLARHRKIHT 506

  Fly   609 SDNPHCCNVCNKPFTRKEHLINHMSRCHTG 638
            .:.|:.||.|.|.|:|..:|..|.: .|.|
Human   507 GEKPYKCNECGKAFSRISYLAQHWT-IHMG 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368
C2H2 Zn finger 251..271 CDD:275368
C2H2 Zn finger 279..299 CDD:275368 4/14 (29%)
COG5048 300..723 CDD:227381 141/339 (42%)
C2H2 Zn finger 307..327 CDD:275368 5/19 (26%)
C2H2 Zn finger 335..355 CDD:275368 8/19 (42%)
C2H2 Zn finger 363..383 CDD:275368 5/19 (26%)
C2H2 Zn finger 391..411 CDD:275368 8/19 (42%)
C2H2 Zn finger 419..439 CDD:275368 9/19 (47%)
C2H2 Zn finger 447..467 CDD:275368 8/19 (42%)
C2H2 Zn finger 475..495 CDD:275368 8/19 (42%)
C2H2 Zn finger 503..523 CDD:275368 6/19 (32%)
C2H2 Zn finger 531..551 CDD:275368 6/19 (32%)
C2H2 Zn finger 559..579 CDD:275368 11/19 (58%)
C2H2 Zn finger 587..607 CDD:275368 8/19 (42%)
C2H2 Zn finger 615..636 CDD:275368 8/20 (40%)
C2H2 Zn finger 644..664 CDD:275368
C2H2 Zn finger 676..696 CDD:275368
C2H2 Zn finger 704..722 CDD:275368
ZNF480NP_653285.2 KRAB 27..87 CDD:214630
KRAB 27..66 CDD:279668
COG5048 <158..501 CDD:227381 133/318 (42%)
C2H2 Zn finger 205..225 CDD:275368 5/19 (26%)
zf-H2C2_2 217..242 CDD:290200 10/24 (42%)
C2H2 Zn finger 233..253 CDD:275368 8/19 (42%)
zf-H2C2_2 245..270 CDD:290200 12/24 (50%)
C2H2 Zn finger 261..281 CDD:275368 5/19 (26%)
zf-H2C2_2 273..298 CDD:290200 8/24 (33%)
C2H2 Zn finger 289..309 CDD:275368 8/19 (42%)
zf-H2C2_2 301..326 CDD:290200 12/24 (50%)
C2H2 Zn finger 317..336 CDD:275368 9/18 (50%)
C2H2 Zn finger 345..365 CDD:275368 8/19 (42%)
zf-H2C2_2 358..382 CDD:290200 11/23 (48%)
C2H2 Zn finger 373..393 CDD:275368 8/19 (42%)
zf-H2C2_2 385..410 CDD:290200 14/24 (58%)
zf-C2H2 399..421 CDD:278523 7/21 (33%)
C2H2 Zn finger 401..421 CDD:275368 6/19 (32%)
zf-H2C2_2 413..437 CDD:290200 11/23 (48%)
C2H2 Zn finger 429..449 CDD:275368 6/19 (32%)
zf-H2C2_2 442..466 CDD:290200 11/23 (48%)
C2H2 Zn finger 457..477 CDD:275368 11/19 (58%)
zf-H2C2_2 469..494 CDD:290200 14/24 (58%)
COG5048 481..>529 CDD:227381 19/47 (40%)
C2H2 Zn finger 485..505 CDD:275368 8/19 (42%)
zf-H2C2_2 497..522 CDD:290200 10/24 (42%)
C2H2 Zn finger 513..533 CDD:275368 8/20 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100020
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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