DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and ZFP28

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_065879.1 Gene:ZFP28 / 140612 HGNCID:17801 Length:868 Species:Homo sapiens


Alignment Length:473 Identity:188/473 - (39%)
Similarity:251/473 - (53%) Gaps:14/473 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 EGGIHGVDGSGNGGNGGGQNVALAPDGTPIATGTHV--CDICGKMFQFRYQLIVHRRYHSERKPF 249
            |..:|..|...|     .|..::....|.|..|..:  |:.|.|.|.....|.||:|.|:..||:
Human   389 EEKVHNRDSIKN-----FQKSSVVIKQTGIYAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPY 448

  Fly   250 MCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNTSLERHMK-RHSTDKPFACTICQKT 313
            .|..||:.|:......||.:.|.|...:.||.|...|..||||.||.: .|:.:|||.|..|.|.
Human   449 KCNECGKAFSDGSSFARHQRCHTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPFDCIDCGKA 513

  Fly   314 FARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVN 378
            |:....|:.|.|.||||.|::|..|.|:|.....:..|.|.||||.|:.||:|:|:|:.......
Human   514 FSDHIGLNQHRRIHTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPYECDVCRKAFSHHASLTQ 578

  Fly   379 HYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTGET 443
            |...|:|:.|.:|..|||.:.:..|||:|:|.||.|.||.|..||||||.......|...||||.
Human   579 HQRVHSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPFECAECGKSFSISSQLATHQRIHTGEK 643

  Fly   444 PHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTK 508
            |:.|..|||.||:|.||..|.:.||||.|:.|..|.|.|::..||:.|.|.||||.|:||..|.|
Human   644 PYECKVCSKAFTQKAHLAQHQKTHTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPYKCMECGK 708

  Fly   509 AFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLT 573
            ||........|.|.|||:.|::|..|.|.|..|..|..|.|.|||:.|:.||.|.|.|:.::.|:
Human   709 AFGDNSSCTQHQRLHTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPYECSVCGKAFSHRQSLS 773

  Fly   574 NHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTG 638
            .|.|:|:|..|::|:.|:|||.:..|||.|.|.|:.:..:......|.|.:..||.:| .|.|||
Human   774 VHQRIHSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSYNYKKSRKVFRQTAHLAHH-QRIHTG 837

  Fly   639 DRPFTCETCGKSFPLKGN 656
            :    ..|| .|.|...|
Human   838 E----SSTC-PSLPSTSN 850

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368 8/19 (42%)
C2H2 Zn finger 251..271 CDD:275368 6/19 (32%)
C2H2 Zn finger 279..299 CDD:275368 10/20 (50%)
COG5048 300..723 CDD:227381 150/357 (42%)
C2H2 Zn finger 307..327 CDD:275368 7/19 (37%)
C2H2 Zn finger 335..355 CDD:275368 6/19 (32%)
C2H2 Zn finger 363..383 CDD:275368 6/19 (32%)
C2H2 Zn finger 391..411 CDD:275368 9/19 (47%)
C2H2 Zn finger 419..439 CDD:275368 8/19 (42%)
C2H2 Zn finger 447..467 CDD:275368 10/19 (53%)
C2H2 Zn finger 475..495 CDD:275368 8/19 (42%)
C2H2 Zn finger 503..523 CDD:275368 7/19 (37%)
C2H2 Zn finger 531..551 CDD:275368 8/19 (42%)
C2H2 Zn finger 559..579 CDD:275368 8/19 (42%)
C2H2 Zn finger 587..607 CDD:275368 10/19 (53%)
C2H2 Zn finger 615..636 CDD:275368 6/20 (30%)
C2H2 Zn finger 644..664 CDD:275368 5/13 (38%)
C2H2 Zn finger 676..696 CDD:275368
C2H2 Zn finger 704..722 CDD:275368
ZFP28NP_065879.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..82
KRAB 103..163 CDD:214630
KRAB 103..142 CDD:279668
KRAB 232..288 CDD:214630
KRAB 232..266 CDD:279668
COG5048 417..806 CDD:227381 164/388 (42%)
zf-C2H2 420..442 CDD:278523 8/21 (38%)
C2H2 Zn finger 422..442 CDD:275368 8/19 (42%)
zf-H2C2_2 434..458 CDD:290200 10/23 (43%)
C2H2 Zn finger 450..470 CDD:275368 6/19 (32%)
zf-H2C2_2 462..487 CDD:290200 8/24 (33%)
C2H2 Zn finger 478..496 CDD:275368 10/17 (59%)
C2H2 Zn finger 507..527 CDD:275368 7/19 (37%)
zf-H2C2_2 520..544 CDD:290200 12/23 (52%)
C2H2 Zn finger 535..555 CDD:275368 6/19 (32%)
zf-H2C2_2 547..572 CDD:290200 12/24 (50%)
C2H2 Zn finger 563..583 CDD:275368 6/19 (32%)
zf-H2C2_2 575..600 CDD:290200 8/24 (33%)
C2H2 Zn finger 591..611 CDD:275368 9/19 (47%)
zf-H2C2_2 603..627 CDD:290200 15/23 (65%)
C2H2 Zn finger 619..639 CDD:275368 8/19 (42%)
zf-H2C2_2 632..656 CDD:290200 11/23 (48%)
C2H2 Zn finger 647..667 CDD:275368 10/19 (53%)
zf-H2C2_2 659..684 CDD:290200 12/24 (50%)
C2H2 Zn finger 675..695 CDD:275368 8/19 (42%)
zf-H2C2_2 687..710 CDD:290200 13/22 (59%)
C2H2 Zn finger 703..723 CDD:275368 7/19 (37%)
zf-H2C2_2 718..740 CDD:290200 10/21 (48%)
C2H2 Zn finger 731..751 CDD:275368 8/19 (42%)
zf-H2C2_2 743..768 CDD:290200 12/24 (50%)
C2H2 Zn finger 759..779 CDD:275368 8/19 (42%)
zf-H2C2_2 771..796 CDD:290200 11/24 (46%)
C2H2 Zn finger 787..807 CDD:275368 10/19 (53%)
C2H2 Zn finger 815..835 CDD:275368 6/20 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 499 1.000 Inparanoid score I1378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100020
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.950

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