DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and LOC1280881

DIOPT Version :10

Sequence 1:NP_477243.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:XP_061518309.1 Gene:LOC1280881 / 1280881 VectorBaseID:AGAMI1_010096 Length:838 Species:Anopheles gambiae


Alignment Length:169 Identity:36/169 - (21%)
Similarity:70/169 - (41%) Gaps:32/169 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 PVDDES---------FMKRFLRPKKYY---PESTFEMLKAFYHM-KAKQNFISDRLTTKSIQNAL 72
            |:|:..         |:|:.|..:..|   ||..|:.|:.|||: ..::::|..|:..|..:..:
Mosquito    76 PIDNSQISECRNGSFFLKQRLAEQVDYTPVPEILFKRLERFYHIDDDRRDYIQRRVVRKDGKLCI 140

  Fly    73 D--DRAVQILPKRDQHGRRILYMEMGAKWNCTKVPSMEVIRCTNLLMEMVGREPATQLHGIVF-V 134
            :  .|.|.|...|::..:..|.:.          |...::   :|...::|....:....|.| |
Mosquito   141 EVYPRIVHITSARNRDIKADLVLR----------PDDTMV---SLRERVIGELSLSTTDNIRFYV 192

  Fly   135 INFDRLSLSHISQFPPKF---VKTVVDHGQKHSPYRIKG 170
            :|.:...|...:|....:   |:.||...::...:.|||
Mosquito   193 MNGENYELIDTAQSIDSYFDTVQKVVVDVEEDGEFFIKG 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_477243.1 C2H2 Zn finger 223..243 CDD:275368
C2H2 Zn finger 251..271 CDD:275368
C2H2 Zn finger 279..299 CDD:275368
COG5048 300..723 CDD:227381
C2H2 Zn finger 307..327 CDD:275368
C2H2 Zn finger 335..355 CDD:275368
C2H2 Zn finger 363..383 CDD:275368
C2H2 Zn finger 391..411 CDD:275368
C2H2 Zn finger 419..439 CDD:275368
C2H2 Zn finger 447..467 CDD:275368
C2H2 Zn finger 475..495 CDD:275368
C2H2 Zn finger 503..523 CDD:275368
C2H2 Zn finger 531..551 CDD:275368
C2H2 Zn finger 559..579 CDD:275368
C2H2 Zn finger 587..607 CDD:275368
C2H2 Zn finger 615..636 CDD:275368
C2H2 Zn finger 644..664 CDD:275368
C2H2 Zn finger 676..696 CDD:275368
C2H2 Zn finger 704..722 CDD:275368
LOC1280881XP_061518309.1 None
Blue background indicates that the domain is not in the aligned region.

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