DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and ZNF573

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_001166161.1 Gene:ZNF573 / 126231 HGNCID:26420 Length:665 Species:Homo sapiens


Alignment Length:530 Identity:192/530 - (36%)
Similarity:272/530 - (51%) Gaps:33/530 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 CDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFA 287
            |..|.|.|...||||:|.|:|...:|:.|:.||:.|.:...||.|.:.|.|...:.|..|...|.
Human   136 CKKCQKKFSSGYQLILHHRFHVIERPYECKECGKNFRSGYQLTLHQRFHTGEKPYECTECGKNFR 200

  Fly   288 NNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHV 352
            :...|..|.:.|:.:|.:.|..|.|.|....|:..|.|.|||..|:.||.|.:.|::..|:..|.
Human   201 SGYQLTVHQRFHTGEKTYECRQCGKAFIYASHIVQHERIHTGGKPYECQECGRAFSQGGHLRIHQ 265

  Fly   353 RKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPF 417
            |.||||.|::|..|.|:|:|:.:.|.|..:||.:.|:.|:.|||.:.|...|..|.|.||.:.|:
Human   266 RVHTGEKPYKCKECGKTFSRRSNLVEHGQFHTDEKPYICEKCGKAFRRGHQLTVHQRVHTGKKPY 330

  Fly   418 RCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTF 482
            .|:.|||.::...:|..|...|.|..|:.|..|.||||...:|..|...||||....|..|.||:
Human   331 ECKECGKGYTTASYFLLHQRIHKGGKPYECKECKKTFTLYRNLTRHQNIHTGEKLFECKQCGKTY 395

  Fly   483 TRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNH 547
            |....|..|.:.||||.|::|..|.|||:...::..|.:.|||....:|..|.||||...:||.|
Human   396 TTGSKLFQHQKTHTGEKPYECKECGKAFSLYGYLKQHQKIHTGMKHFECKECKKTFTLYRNLTRH 460

  Fly   548 V----------------------------RQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSP 584
            .                            :.|||:.|::|..|.|||:...:|..|.::|||..|
Human   461 QNIHTGKKLFECQECGKAYSTGSNLIQHRKTHTGEKPYKCKECGKTFSLHGYLNQHQKIHTGMKP 525

  Fly   585 HKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGK 649
            ::|:.|:||||...:|..|...|:.:.|..|..|.|.|.|..||..|.| .|...:|:.|:.|||
Human   526 YECKVCRKTFTFYRNLTLHQSIHTDEKPFECKECGKTFRRSSHLTAHQS-IHADKKPYECKECGK 589

  Fly   650 SFPLKGNLLFHQRSHTKGQEMERPFACEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVER 714
            :|.:.|.|..||:.||.|    :|:.|::|.|.|....:||.|.|.|:||||:.|..|.|.|...
Human   590 AFKMYGYLTQHQKIHTGG----KPYECKECGKAFSRASNLVQHERIHTGEKPYVCKQCGKTFRYG 650

  Fly   715 GNLKRHMKMN 724
            ..||.|.:::
Human   651 SALKAHQRIH 660

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368 10/19 (53%)
C2H2 Zn finger 251..271 CDD:275368 7/19 (37%)
C2H2 Zn finger 279..299 CDD:275368 5/19 (26%)
COG5048 300..723 CDD:227381 165/450 (37%)
C2H2 Zn finger 307..327 CDD:275368 7/19 (37%)
C2H2 Zn finger 335..355 CDD:275368 7/19 (37%)
C2H2 Zn finger 363..383 CDD:275368 7/19 (37%)
C2H2 Zn finger 391..411 CDD:275368 8/19 (42%)
C2H2 Zn finger 419..439 CDD:275368 6/19 (32%)
C2H2 Zn finger 447..467 CDD:275368 8/19 (42%)
C2H2 Zn finger 475..495 CDD:275368 7/19 (37%)
C2H2 Zn finger 503..523 CDD:275368 6/19 (32%)
C2H2 Zn finger 531..551 CDD:275368 9/47 (19%)
C2H2 Zn finger 559..579 CDD:275368 7/19 (37%)
C2H2 Zn finger 587..607 CDD:275368 8/19 (42%)
C2H2 Zn finger 615..636 CDD:275368 9/20 (45%)
C2H2 Zn finger 644..664 CDD:275368 9/19 (47%)
C2H2 Zn finger 676..696 CDD:275368 8/19 (42%)
C2H2 Zn finger 704..722 CDD:275368 7/17 (41%)
ZNF573NP_001166161.1 KRAB 28..89 CDD:214630
KRAB 28..67 CDD:279668
C2H2 Zn finger 136..156 CDD:275368 10/19 (53%)
C2H2 Zn finger 164..184 CDD:275368 7/19 (37%)
C2H2 Zn finger 192..212 CDD:275368 5/19 (26%)
C2H2 Zn finger 220..240 CDD:275368 7/19 (37%)
COG5048 244..628 CDD:227381 140/388 (36%)
C2H2 Zn finger 248..268 CDD:275368 7/19 (37%)
zf-H2C2_2 260..285 CDD:290200 12/24 (50%)
C2H2 Zn finger 276..292 CDD:275368 6/15 (40%)
C2H2 Zn finger 304..324 CDD:275368 8/19 (42%)
C2H2 Zn finger 332..352 CDD:275368 6/19 (32%)
C2H2 Zn finger 360..380 CDD:275368 8/19 (42%)
C2H2 Zn finger 388..408 CDD:275368 7/19 (37%)
zf-H2C2_2 401..424 CDD:290200 11/22 (50%)
C2H2 Zn finger 416..436 CDD:275368 6/19 (32%)
C2H2 Zn finger 444..464 CDD:275368 9/19 (47%)
C2H2 Zn finger 472..492 CDD:275368 0/19 (0%)
zf-H2C2_2 484..508 CDD:290200 8/23 (35%)
C2H2 Zn finger 500..520 CDD:275368 7/19 (37%)
zf-H2C2_2 512..536 CDD:290200 10/23 (43%)
C2H2 Zn finger 528..548 CDD:275368 8/19 (42%)
C2H2 Zn finger 556..576 CDD:275368 9/20 (45%)
C2H2 Zn finger 584..604 CDD:275368 9/19 (47%)
zf-H2C2_2 596..621 CDD:290200 11/28 (39%)
C2H2 Zn finger 612..632 CDD:275368 8/19 (42%)
zf-H2C2_2 624..649 CDD:290200 13/24 (54%)
C2H2 Zn finger 640..660 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 499 1.000 Inparanoid score I1378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100020
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.860

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