DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and ZNF543

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_998763.2 Gene:ZNF543 / 125919 HGNCID:25281 Length:600 Species:Homo sapiens


Alignment Length:491 Identity:173/491 - (35%)
Similarity:238/491 - (48%) Gaps:56/491 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 GNGGQQVTVTTTSSSTSSG-GSTTSGGTTTTAGELLMPKMEGGIHGVDGSGNGGNGGGQNVALAP 211
            |.|.|:..:....||...| ||.....|..|..::   ..||.::..|..|              
Human   138 GIGPQRGKLLEKMSSERDGLGSDDGVCTKITQKQV---STEGDLYECDSHG-------------- 185

  Fly   212 DGTPIA-------TGTHVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGK 269
               |:.       ..::.|:.|||:|:....|:.|.|.|::.||:.|..||:.|:.|..|.:|..
Human   186 ---PVTDALIREEKNSYKCEECGKVFKKNALLVQHERIHTQVKPYECTECGKTFSKSTHLLQHLI 247

  Fly   270 IHIGGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFR 334
            ||.|                            :||:.|..|.|.|.|:.||..|.|.|:||.|::
Human   248 IHTG----------------------------EKPYKCMECGKAFNRRSHLTRHQRIHSGEKPYK 284

  Fly   335 CQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYT 399
            |..|.|.||.:...|.|.|.||||.|..|..|.|:|..:..::.||:.|||:.|::|..|||.:.
Human   285 CSECGKAFTHRSTFVLHHRSHTGEKPFVCKECGKAFRDRPGFIRHYIIHTGEKPYECIECGKAFN 349

  Fly   400 RKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHV 464
            |:.:|..|.:.||...||.|..|||:|........|.:.||||.|::|..|.|.|.|:.||..|.
Human   350 RRSYLTWHQQIHTGVKPFECNECGKAFCESADLIQHYIIHTGEKPYKCMECGKAFNRRSHLKQHQ 414

  Fly   465 RQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPH 529
            |.||||.|:.||.|.|.||.....|.|.|.||||.|::|..|.|||:.:..::.|...||||.|:
Human   415 RIHTGEKPYECSECGKAFTHCSTFVLHKRTHTGEKPYECKECGKAFSDRADLIRHFSIHTGEKPY 479

  Fly   530 KCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTF 594
            :|..|.|.|.|..|||.|.:.|||:.|:.|..|.|.|.|..:|..|..:|||:.|::|..|.|.|
Human   480 ECVECGKAFNRSSHLTRHQQIHTGEKPYECIQCGKAFCRSANLIRHSIIHTGEKPYECSECGKAF 544

  Fly   595 TRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLIN 630
            .|...|.:|.|.|:..||.......:||...:..:|
Human   545 NRGSSLTHHQRIHTGRNPTIVTDVGRPFMTAQTSVN 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368 8/19 (42%)
C2H2 Zn finger 251..271 CDD:275368 7/19 (37%)
C2H2 Zn finger 279..299 CDD:275368 0/19 (0%)
COG5048 300..723 CDD:227381 137/331 (41%)
C2H2 Zn finger 307..327 CDD:275368 9/19 (47%)
C2H2 Zn finger 335..355 CDD:275368 8/19 (42%)
C2H2 Zn finger 363..383 CDD:275368 6/19 (32%)
C2H2 Zn finger 391..411 CDD:275368 7/19 (37%)
C2H2 Zn finger 419..439 CDD:275368 6/19 (32%)
C2H2 Zn finger 447..467 CDD:275368 9/19 (47%)
C2H2 Zn finger 475..495 CDD:275368 9/19 (47%)
C2H2 Zn finger 503..523 CDD:275368 6/19 (32%)
C2H2 Zn finger 531..551 CDD:275368 9/19 (47%)
C2H2 Zn finger 559..579 CDD:275368 7/19 (37%)
C2H2 Zn finger 587..607 CDD:275368 8/19 (42%)
C2H2 Zn finger 615..636 CDD:275368 3/16 (19%)
C2H2 Zn finger 644..664 CDD:275368
C2H2 Zn finger 676..696 CDD:275368
C2H2 Zn finger 704..722 CDD:275368
ZNF543NP_998763.2 KRAB 9..69 CDD:214630
COG5048 <75..329 CDD:227381 68/238 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 110..131
C2H2 Zn finger 201..221 CDD:275368 8/19 (42%)
COG5048 223..562 CDD:227381 144/366 (39%)
C2H2 Zn finger 229..249 CDD:275368 7/19 (37%)
C2H2 Zn finger 257..277 CDD:275368 9/19 (47%)
C2H2 Zn finger 285..305 CDD:275368 8/19 (42%)
C2H2 Zn finger 313..333 CDD:275368 6/19 (32%)
C2H2 Zn finger 341..361 CDD:275368 7/19 (37%)
C2H2 Zn finger 369..389 CDD:275368 6/19 (32%)
C2H2 Zn finger 397..417 CDD:275368 9/19 (47%)
C2H2 Zn finger 425..445 CDD:275368 9/19 (47%)
C2H2 Zn finger 453..473 CDD:275368 6/19 (32%)
C2H2 Zn finger 481..501 CDD:275368 9/19 (47%)
C2H2 Zn finger 509..529 CDD:275368 7/19 (37%)
C2H2 Zn finger 537..557 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100020
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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