DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and ZNF268

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_001159353.1 Gene:ZNF268 / 10795 HGNCID:13061 Length:947 Species:Homo sapiens


Alignment Length:509 Identity:215/509 - (42%)
Similarity:285/509 - (55%) Gaps:7/509 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   216 IATG--THVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFT 278
            |.||  .:.|:.|.|.|..:..|:||:|.|:..||::|..||:.||....|..|..||.|...:.
Human   409 IHTGEKPYECNECQKAFNTKSNLMVHQRTHTGEKPYVCSDCGKAFTFKSQLIVHQGIHTGVKPYG 473

  Fly   279 CIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFT 343
            ||.|...|:..:.|..|.:.|:..||:.|..|.|.|..|.:|..|.|:||||....|..|.|.|:
Human   474 CIQCGKGFSLKSQLIVHQRSHTGMKPYVCNECGKAFRSKSYLIIHTRTHTGEKLHECNNCGKAFS 538

  Fly   344 RKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHM 408
            .|..::.|.|.||||.|:.|..|.|:|:||...::|...|.|:.|::|..|||.:..|..|..|.
Human   539 FKSQLIIHQRIHTGENPYECHECGKAFSRKYQLISHQRTHAGEKPYECTDCGKAFGLKSQLIIHQ 603

  Fly   409 RSHTNETPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPH 473
            |:||.|.||.|..|.|:|:.|.:...|...||||.|:.|:.|.|.||.|..|:.|...|||..|:
Human   604 RTHTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPYSCNECGKAFTFKSQLIVHKGVHTGVKPY 668

  Fly   474 RCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTF 538
            .||.|.|||:.|..|:.|.|.|||..|:.|:.|.|||..|.:::.|:|.||||.||:|..|.|:|
Human   669 GCSQCAKTFSLKSQLIVHQRSHTGVKPYGCSECGKAFRSKSYLIIHMRTHTGEKPHECRECGKSF 733

  Fly   539 TRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNH 603
            :....|..|.|.|||::|:.||.|.|.|.||:.|.:|.|.|.|:.|:.|..|.|.|:.|.:|..|
Human   734 SFNSQLIVHQRIHTGENPYECSECGKAFNRKDQLISHQRTHAGEKPYGCSECGKAFSSKSYLIIH 798

  Fly   604 MRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQ 668
            ||.||.:.|:.||.|.|.|..|..||.| .|.|.|..|:.|..|.|||..|..||.|||.||:  
Human   799 MRTHSGEKPYECNECGKAFIWKSLLIVH-ERTHAGVNPYKCSQCEKSFSGKLRLLVHQRMHTR-- 860

  Fly   669 EMERPFACEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMK 722
              |:|:.|.:|.|.||....|:.|.|:||||||:.|..|.|.|.::..|..|.:
Human   861 --EKPYECSECGKAFIRNSQLIVHQRTHSGEKPYGCNECGKTFSQKSILSAHQR 912

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368 8/19 (42%)
C2H2 Zn finger 251..271 CDD:275368 7/19 (37%)
C2H2 Zn finger 279..299 CDD:275368 6/19 (32%)
COG5048 300..723 CDD:227381 184/423 (43%)
C2H2 Zn finger 307..327 CDD:275368 8/19 (42%)
C2H2 Zn finger 335..355 CDD:275368 7/19 (37%)
C2H2 Zn finger 363..383 CDD:275368 7/19 (37%)
C2H2 Zn finger 391..411 CDD:275368 8/19 (42%)
C2H2 Zn finger 419..439 CDD:275368 6/19 (32%)
C2H2 Zn finger 447..467 CDD:275368 8/19 (42%)
C2H2 Zn finger 475..495 CDD:275368 10/19 (53%)
C2H2 Zn finger 503..523 CDD:275368 8/19 (42%)
C2H2 Zn finger 531..551 CDD:275368 7/19 (37%)
C2H2 Zn finger 559..579 CDD:275368 10/19 (53%)
C2H2 Zn finger 587..607 CDD:275368 9/19 (47%)
C2H2 Zn finger 615..636 CDD:275368 10/20 (50%)
C2H2 Zn finger 644..664 CDD:275368 11/19 (58%)
C2H2 Zn finger 676..696 CDD:275368 8/19 (42%)
C2H2 Zn finger 704..722 CDD:275368 6/17 (35%)
ZNF268NP_001159353.1 KRAB 81..141 CDD:214630
KRAB 81..120 CDD:279668
C2H2 Zn finger 278..298 CDD:275368
C2H2 Zn finger 306..326 CDD:275368
C2H2 Zn finger 334..354 CDD:275368
zf-H2C2_2 347..371 CDD:290200
C2H2 Zn finger 362..382 CDD:275368
zf-H2C2_2 375..397 CDD:290200