DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and ZNF460

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_006626.3 Gene:ZNF460 / 10794 HGNCID:21628 Length:562 Species:Homo sapiens


Alignment Length:435 Identity:155/435 - (35%)
Similarity:205/435 - (47%) Gaps:25/435 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 VALAPDGTPIATGTHVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIH 271
            ::|..:|...|.|     ||..|.|            ::..|   :....||.:...:| ...||
Human   122 MSLEHEGLATADG-----ICSMMIQ------------NQVSP---EDALYGFDSYGPVT-DSLIH 165

  Fly   272 IGGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQ 336
            .|...:.....||   .|..|.:|.:.....||:.|..|.|.|.:.:||..|...||||.|::|.
Human   166 EGENSYKFEEMFN---ENCFLVQHEQILPRVKPYDCPECGKAFGKSKHLLQHHIIHTGEKPYKCL 227

  Fly   337 YCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRK 401
            .|.|.|.|:.|:..|.|.|.|:.|..|..|.::|.|..|...|...|:|:.|..|:.|||.:|.:
Human   228 ECGKDFNRRSHLTRHQRTHNGDKPFVCSECGRTFNRGSHLTRHQRVHSGEKPFVCNECGKAFTYR 292

  Fly   402 EHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQ 466
            .:...|.:||..:.||.|..|||.|........|.:.||||.|.:|..|.|.|..:.||..|.|.
Human   293 SNFVLHNKSHNEKKPFACSECGKGFYESTALIQHFIIHTGERPFKCLECGKAFNCRSHLKQHERI 357

  Fly   467 HTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKC 531
            ||||.|..||.|.|.||.....|.|.|.||||.||:|..|.|||:.:..::.|...||||.|::|
Human   358 HTGEKPFVCSQCGKAFTHYSTYVLHERAHTGEKPFECKECGKAFSIRKDLIRHFNIHTGEKPYEC 422

  Fly   532 TYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTR 596
            ..|.|.|||...||.|...|||:.|:.|..|.|.|.|..:|..|..:|||:.|::|..|.|.|.|
Human   423 LQCGKAFTRMSGLTRHQWIHTGEKPYVCIQCGKAFCRTTNLIRHFSIHTGEKPYECVECGKAFNR 487

  Fly   597 KEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRP 641
            :..|..|.|.|:::..|..............||.| |..||...|
Human   488 RSPLTRHQRIHTAEKSHEPIQSGNVSCESTDLIQH-SIIHTESSP 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368 4/19 (21%)
C2H2 Zn finger 251..271 CDD:275368 3/19 (16%)
C2H2 Zn finger 279..299 CDD:275368 5/19 (26%)
COG5048 300..723 CDD:227381 135/342 (39%)
C2H2 Zn finger 307..327 CDD:275368 7/19 (37%)
C2H2 Zn finger 335..355 CDD:275368 8/19 (42%)
C2H2 Zn finger 363..383 CDD:275368 6/19 (32%)
C2H2 Zn finger 391..411 CDD:275368 6/19 (32%)
C2H2 Zn finger 419..439 CDD:275368 6/19 (32%)
C2H2 Zn finger 447..467 CDD:275368 8/19 (42%)
C2H2 Zn finger 475..495 CDD:275368 9/19 (47%)
C2H2 Zn finger 503..523 CDD:275368 6/19 (32%)
C2H2 Zn finger 531..551 CDD:275368 9/19 (47%)
C2H2 Zn finger 559..579 CDD:275368 7/19 (37%)
C2H2 Zn finger 587..607 CDD:275368 8/19 (42%)
C2H2 Zn finger 615..636 CDD:275368 4/20 (20%)
C2H2 Zn finger 644..664 CDD:275368
C2H2 Zn finger 676..696 CDD:275368
C2H2 Zn finger 704..722 CDD:275368
ZNF460NP_006626.3 KRAB 12..53 CDD:307490
C2H2 Zn finger 198..218 CDD:275368 7/19 (37%)
COG5048 222..552 CDD:227381 122/311 (39%)
C2H2 Zn finger 226..246 CDD:275368 8/19 (42%)
C2H2 Zn finger 254..274 CDD:275368 6/19 (32%)
C2H2 Zn finger 282..302 CDD:275368 6/19 (32%)
C2H2 Zn finger 310..330 CDD:275368 6/19 (32%)
C2H2 Zn finger 338..358 CDD:275368 8/19 (42%)
C2H2 Zn finger 366..386 CDD:275368 9/19 (47%)
C2H2 Zn finger 394..414 CDD:275368 6/19 (32%)
C2H2 Zn finger 422..442 CDD:275368 9/19 (47%)
C2H2 Zn finger 450..470 CDD:275368 7/19 (37%)
C2H2 Zn finger 478..498 CDD:275368 8/19 (42%)
C2H2 Zn finger 506..526 CDD:275368 4/20 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100020
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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