DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and ZNF234

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_001138296.1 Gene:ZNF234 / 10780 HGNCID:13027 Length:700 Species:Homo sapiens


Alignment Length:505 Identity:201/505 - (39%)
Similarity:278/505 - (55%) Gaps:5/505 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 THVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFN 284
            :|.||.|||.|.:...|.:|:|.|...|.:.|.|||:.|:.|..|..|.::|.....|.|:.|..
Human   175 SHTCDECGKSFCYISALHIHQRVHMGEKCYKCDVCGKEFSQSSHLQTHQRVHTVEKPFKCVECGK 239

  Fly   285 VFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMV 349
            .|:..::|..|.|.||.:||:.|..|.:.|....||..|.|.||||.||:|..|.|.|.|:..:.
Human   240 GFSRRSTLTVHCKLHSGEKPYNCEECGRAFIHASHLQEHQRIHTGEKPFKCDTCGKNFRRRSALN 304

  Fly   350 NHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNE 414
            ||...||||.|::|:.|.|.||...:...|...|||:.|::|:.|||.:.:......|.|.||.|
Human   305 NHCMVHTGEKPYKCEDCGKCFTCSSNLRIHQRVHTGEKPYKCEECGKCFIQPSQFQAHRRIHTGE 369

  Fly   415 TPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCM 479
            .|:.|::|||.|.....|..|...||||.|::|:.|.|:|..|.|...|:..||||.|::|..|.
Human   370 KPYVCKVCGKGFIYSSSFQAHQGVHTGEKPYKCNECGKSFRMKIHYQVHLVVHTGEKPYKCEVCG 434

  Fly   480 KTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHL 544
            |.|.:..:|..|::.|:.:.||||..|.:.|.:...:..|...||||.|:||..|.|.|:|:..|
Human   435 KAFRQSSYLKIHLKAHSVQKPFKCEECGQGFNQSSRLQIHQLIHTGEKPYKCEECGKGFSRRADL 499

  Fly   545 TNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSS 609
            ..|.|.|||:.|:.|..|.|.|::..||..|.|:|:|:.|.|||.|.|:|:|..||..|.:.|:.
Human   500 KIHCRIHTGEKPYNCEECGKVFSQASHLLTHQRVHSGEKPFKCEECGKSFSRSAHLQAHQKVHTG 564

  Fly   610 DNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQEMERPF 674
            :.|:.|..|.|.|....:|..| .|.|||::|:||..|||.|....:|..||..||.    |:|:
Human   565 EKPYKCGECGKGFKWSLNLDMH-QRVHTGEKPYTCGECGKHFSQASSLQLHQSVHTG----EKPY 624

  Fly   675 ACEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMN 724
            .|:.|.|.|.....|..|.|.|:||||:.|.:|.|.|..|.||..|.|::
Human   625 KCDVCGKVFSRSSQLQYHRRVHTGEKPYKCEICGKRFSWRSNLVSHHKIH 674

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368 9/19 (47%)
C2H2 Zn finger 251..271 CDD:275368 8/19 (42%)
C2H2 Zn finger 279..299 CDD:275368 6/19 (32%)
COG5048 300..723 CDD:227381 171/422 (41%)
C2H2 Zn finger 307..327 CDD:275368 7/19 (37%)
C2H2 Zn finger 335..355 CDD:275368 7/19 (37%)
C2H2 Zn finger 363..383 CDD:275368 6/19 (32%)
C2H2 Zn finger 391..411 CDD:275368 6/19 (32%)
C2H2 Zn finger 419..439 CDD:275368 7/19 (37%)
C2H2 Zn finger 447..467 CDD:275368 7/19 (37%)
C2H2 Zn finger 475..495 CDD:275368 6/19 (32%)
C2H2 Zn finger 503..523 CDD:275368 4/19 (21%)
C2H2 Zn finger 531..551 CDD:275368 8/19 (42%)
C2H2 Zn finger 559..579 CDD:275368 8/19 (42%)
C2H2 Zn finger 587..607 CDD:275368 9/19 (47%)
C2H2 Zn finger 615..636 CDD:275368 7/20 (35%)
C2H2 Zn finger 644..664 CDD:275368 8/19 (42%)
C2H2 Zn finger 676..696 CDD:275368 7/19 (37%)
C2H2 Zn finger 704..722 CDD:275368 8/17 (47%)
ZNF234NP_001138296.1 KRAB 8..65 CDD:214630
KRAB 8..47 CDD:279668
KRNB 91..147
COG5048 <101..306 CDD:227381 50/130 (38%)
C2H2 Zn finger 150..170 CDD:275368
C2H2 Zn finger 178..198 CDD:275368 9/19 (47%)
zf-C2H2 204..226 CDD:278523 8/21 (38%)
C2H2 Zn finger 206..226 CDD:275368 8/19 (42%)
zf-H2C2_2 218..243 CDD:290200 7/24 (29%)
C2H2 Zn finger 234..254 CDD:275368 6/19 (32%)
COG5048 258..672 CDD:227381 170/418 (41%)
C2H2 Zn finger 262..282 CDD:275368 7/19 (37%)
zf-H2C2_2 274..299 CDD:290200 14/24 (58%)
C2H2 Zn finger 290..310 CDD:275368 7/19 (37%)
C2H2 Zn finger 318..338 CDD:275368 6/19 (32%)
zf-H2C2_2 330..355 CDD:290200 9/24 (38%)
C2H2 Zn finger 346..366 CDD:275368 6/19 (32%)
zf-H2C2_2 359..383 CDD:290200 11/23 (48%)
C2H2 Zn finger 374..394 CDD:275368 7/19 (37%)
C2H2 Zn finger 402..422 CDD:275368 7/19 (37%)
zf-H2C2_2 414..439 CDD:290200 11/24 (46%)
C2H2 Zn finger 430..450 CDD:275368 6/19 (32%)
C2H2 Zn finger 458..478 CDD:275368 4/19 (21%)
zf-H2C2_2 471..495 CDD:290200 11/23 (48%)
C2H2 Zn finger 486..506 CDD:275368 8/19 (42%)
zf-H2C2_2 498..523 CDD:290200 11/24 (46%)
C2H2 Zn finger 514..534 CDD:275368 8/19 (42%)
zf-H2C2_2 526..551 CDD:290200 13/24 (54%)
C2H2 Zn finger 542..562 CDD:275368 9/19 (47%)
zf-H2C2_2 554..578 CDD:290200 8/23 (35%)
C2H2 Zn finger 570..590 CDD:275368 7/20 (35%)
zf-H2C2_2 582..607 CDD:290200 13/25 (52%)
C2H2 Zn finger 598..618 CDD:275368 8/19 (42%)
zf-H2C2_2 610..635 CDD:290200 11/28 (39%)
C2H2 Zn finger 626..646 CDD:275368 7/19 (37%)
zf-H2C2_2 639..662 CDD:290200 11/22 (50%)
C2H2 Zn finger 654..674 CDD:275368 9/19 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 499 1.000 Inparanoid score I1378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100020
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.860

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