DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and Gm4631

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:XP_017174895.1 Gene:Gm4631 / 102633156 MGIID:3782813 Length:498 Species:Mus musculus


Alignment Length:447 Identity:173/447 - (38%)
Similarity:233/447 - (52%) Gaps:5/447 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   258 FTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDN 322
            |.||:...||.:..........|.|...||..:..:||..:|:.:|...|..|.|.|.....|..
Mouse    56 FQTSRSHGRHERSCSAEQPSEFIQCGKAFAYESGRQRHQIKHNGEKHHDCNQCGKDFRTWNVLQI 120

  Fly   323 HFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQT 387
            |.|:||||.|:.|:.|.|.|.|..|:..|.|.|.||..:.|:.|.|:|.|:.:...|...|||:.
Mouse   121 HKRTHTGEKPYDCKQCGKVFARSCHLQIHNRTHAGEKQYECNQCGKAFKRRINLQIHKRTHTGEK 185

  Fly   388 PHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSK 452
            |::|:.|||.:.....|..|.|:||.|.|:.|:.|||:||:..|...|...||||.|:.|:.|.|
Mouse   186 PYECNQCGKAFASSGELQKHKRTHTGEKPYECKQCGKAFSQSSHLRIHKRTHTGEKPYECNQCGK 250

  Fly   453 TFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMV 517
            .|.|...|..|.|.||||.|:.|..|.|.|....||..|.|.|||:.|::|..|.|||.....:.
Mouse   251 AFARSGDLQKHKRTHTGEKPYECKQCGKAFAHSSHLHKHERTHTGDKPYECKQCGKAFAVIYTLQ 315

  Fly   518 NHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGD 582
            .|.|.|||:.|::|..|.|.|.....|..|.|.|||:.|::|..|.|.|.|..||..|.|.|||:
Mouse   316 MHKRTHTGDKPYECKQCGKAFAVIYTLQMHKRTHTGEKPYKCKQCGKAFARSCHLRIHKRTHTGE 380

  Fly   583 SPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETC 647
            .|::|..|.|.|.....|..|.|.|:.:.|:.||.|.|.|..:..|..| .|.|||::|:.|..|
Mouse   381 KPYECNQCGKAFAESSTLQIHNRTHTGEKPYECNQCGKAFITRRVLQIH-KRTHTGEKPYECNQC 444

  Fly   648 GKSFPLKGNLLFHQRSHTKGQEMERPFACEKCPKNFICKGHLVSHMRSHSGEKPHAC 704
            ||:|....:|..|:|:||.    |:|:.|..|.|.|.....|..|.|:::||:.:.|
Mouse   445 GKAFARSCDLQKHKRTHTG----EKPYECNHCGKAFAQSSSLRIHKRTYTGERQYEC 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368
C2H2 Zn finger 251..271 CDD:275368 5/12 (42%)
C2H2 Zn finger 279..299 CDD:275368 6/19 (32%)
COG5048 300..723 CDD:227381 161/405 (40%)
C2H2 Zn finger 307..327 CDD:275368 7/19 (37%)
C2H2 Zn finger 335..355 CDD:275368 8/19 (42%)
C2H2 Zn finger 363..383 CDD:275368 6/19 (32%)
C2H2 Zn finger 391..411 CDD:275368 7/19 (37%)
C2H2 Zn finger 419..439 CDD:275368 8/19 (42%)
C2H2 Zn finger 447..467 CDD:275368 8/19 (42%)
C2H2 Zn finger 475..495 CDD:275368 8/19 (42%)
C2H2 Zn finger 503..523 CDD:275368 7/19 (37%)
C2H2 Zn finger 531..551 CDD:275368 7/19 (37%)
C2H2 Zn finger 559..579 CDD:275368 9/19 (47%)
C2H2 Zn finger 587..607 CDD:275368 7/19 (37%)
C2H2 Zn finger 615..636 CDD:275368 8/20 (40%)
C2H2 Zn finger 644..664 CDD:275368 8/19 (42%)
C2H2 Zn finger 676..696 CDD:275368 7/19 (37%)
C2H2 Zn finger 704..722 CDD:275368 1/1 (100%)
Gm4631XP_017174895.1 KRAB 3..44 CDD:396083
COG5048 74..486 CDD:227381 163/416 (39%)
C2H2 Zn finger 79..97 CDD:275368 5/17 (29%)
C2H2 Zn finger 105..125 CDD:275368 7/19 (37%)
C2H2 Zn finger 133..153 CDD:275368 8/19 (42%)
C2H2 Zn finger 161..181 CDD:275368 6/19 (32%)
C2H2 Zn finger 189..209 CDD:275368 7/19 (37%)
C2H2 Zn finger 217..237 CDD:275368 8/19 (42%)
C2H2 Zn finger 245..265 CDD:275368 8/19 (42%)
C2H2 Zn finger 273..293 CDD:275368 8/19 (42%)
C2H2 Zn finger 301..321 CDD:275368 7/19 (37%)
C2H2 Zn finger 329..349 CDD:275368 7/19 (37%)
C2H2 Zn finger 357..377 CDD:275368 9/19 (47%)
C2H2 Zn finger 385..405 CDD:275368 7/19 (37%)
C2H2 Zn finger 413..433 CDD:275368 8/20 (40%)
C2H2 Zn finger 441..461 CDD:275368 8/19 (42%)
C2H2 Zn finger 469..488 CDD:275368 6/18 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100020
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.900

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