DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment crol and AW146154

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_001028702.1 Gene:AW146154 / 101835 MGIID:2142212 Length:468 Species:Mus musculus


Alignment Length:417 Identity:161/417 - (38%)
Similarity:226/417 - (54%) Gaps:5/417 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   286 FANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVN 350
            |..:....||.:.|:.:||...|.|.|.||.:.|...|.|.||||.|:......|.|....|:..
Mouse    56 FQRSRRYGRHERSHTGEKPSVYTQCNKAFAYQSHPQRHHRIHTGEKPYEGIQHDKAFAHHNHLPR 120

  Fly   351 HVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNET 415
            ..|.|.||.|::|:.|.|||....:...|...|:|:.||:|:.|||.:....:|..|.|:||.|.
Mouse   121 RERIHAGEKPYKCNQCGKSFAHCSYLRKHKRIHSGEKPHECNQCGKAFACHSNLRIHKRTHTGEK 185

  Fly   416 PFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMK 480
            |:.|..||::|:.:.:...|...||||.|:.|:.|.:.|....||..|.|.||||.|::|:.|.|
Mouse   186 PYECNQCGQAFACQGNLRLHERTHTGEKPYECNQCGQAFASHSHLQIHKRTHTGEKPYKCNQCDK 250

  Fly   481 TFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLT 545
            .|::...|..|.|.||.|.|::|..|.||:.....:..|.|.||||.|::|..|.|.|.....|.
Mouse   251 AFSQGSSLQIHKRTHTKEKPYECNQCGKAYICHSSLRIHKRTHTGEKPYECNQCGKAFASHSTLR 315

  Fly   546 NHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSD 610
            .|.|.||.:.|:.|:.|.|.|||...|..|.|.|||:.|:||:.|.|.|.::.||..|.|.|:.:
Mouse   316 IHKRTHTAEKPYECNQCGKAFTRHNSLQIHKRTHTGEKPYKCDECDKAFAQQGHLRIHKRTHTGE 380

  Fly   611 NPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQEMERPFA 675
            .|:.|:.|:|.|.|..||..| .|.|||::|:.|..|.|:|...|:|..|:.:||    .|:|:.
Mouse   381 KPYKCSQCDKAFARHSHLQIH-ERIHTGEKPYRCNQCNKAFAQYGSLQIHKSTHT----AEKPYK 440

  Fly   676 CEKCPKNFICKGHLVSHMRSHSGEKPH 702
            |.:|.|.|....:|..|.|:|:.|||:
Mouse   441 CNECGKTFSQLSYLKIHKRTHNREKPY 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368
C2H2 Zn finger 251..271 CDD:275368
C2H2 Zn finger 279..299 CDD:275368 3/12 (25%)
COG5048 300..723 CDD:227381 157/403 (39%)
C2H2 Zn finger 307..327 CDD:275368 8/19 (42%)
C2H2 Zn finger 335..355 CDD:275368 4/19 (21%)
C2H2 Zn finger 363..383 CDD:275368 6/19 (32%)
C2H2 Zn finger 391..411 CDD:275368 7/19 (37%)
C2H2 Zn finger 419..439 CDD:275368 5/19 (26%)
C2H2 Zn finger 447..467 CDD:275368 7/19 (37%)
C2H2 Zn finger 475..495 CDD:275368 7/19 (37%)
C2H2 Zn finger 503..523 CDD:275368 6/19 (32%)
C2H2 Zn finger 531..551 CDD:275368 7/19 (37%)
C2H2 Zn finger 559..579 CDD:275368 9/19 (47%)
C2H2 Zn finger 587..607 CDD:275368 8/19 (42%)
C2H2 Zn finger 615..636 CDD:275368 9/20 (45%)
C2H2 Zn finger 644..664 CDD:275368 7/19 (37%)
C2H2 Zn finger 676..696 CDD:275368 7/19 (37%)
C2H2 Zn finger 704..722 CDD:275368
AW146154NP_001028702.1 KRAB 4..>45 CDD:214630
KRAB 4..43 CDD:279668
C2H2 Zn finger 77..97 CDD:275368 8/19 (42%)
C2H2 Zn finger 109..125 CDD:275368 4/15 (27%)
C2H2 Zn finger 133..153 CDD:275368 6/19 (32%)
zf-H2C2_2 145..170 CDD:290200 9/24 (38%)
COG5048 157..466 CDD:227381 124/313 (40%)
C2H2 Zn finger 161..181 CDD:275368 7/19 (37%)
zf-H2C2_2 173..198 CDD:290200 11/24 (46%)
C2H2 Zn finger 189..209 CDD:275368 5/19 (26%)
zf-H2C2_2 201..226 CDD:290200 9/24 (38%)
C2H2 Zn finger 217..237 CDD:275368 7/19 (37%)
zf-H2C2_2 229..254 CDD:290200 13/24 (54%)
C2H2 Zn finger 245..265 CDD:275368 7/19 (37%)
C2H2 Zn finger 273..293 CDD:275368 6/19 (32%)
zf-H2C2_2 285..310 CDD:290200 11/24 (46%)
C2H2 Zn finger 301..321 CDD:275368 7/19 (37%)
zf-H2C2_2 314..338 CDD:290200 10/23 (43%)
C2H2 Zn finger 329..349 CDD:275368 9/19 (47%)
zf-H2C2_2 341..366 CDD:290200 12/24 (50%)
C2H2 Zn finger 357..377 CDD:275368 8/19 (42%)
zf-H2C2_2 369..394 CDD:290200 10/24 (42%)
C2H2 Zn finger 385..405 CDD:275368 9/20 (45%)
zf-H2C2_2 397..422 CDD:290200 12/25 (48%)
C2H2 Zn finger 413..433 CDD:275368 7/19 (37%)
zf-H2C2_2 425..450 CDD:290200 10/28 (36%)
C2H2 Zn finger 441..461 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100020
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.900

Return to query results.
Submit another query.