DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and Zfp534

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:XP_036019448.1 Gene:Zfp534 / 100503584 MGIID:3650650 Length:698 Species:Mus musculus


Alignment Length:487 Identity:199/487 - (40%)
Similarity:278/487 - (57%) Gaps:5/487 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   216 IATGTHVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCI 280
            ||...:.|....|....|.:|...:|.:..:||:......:.||....|:.|..||....::.|.
Mouse   216 IAGNPYKCSEFHKYLTQREKLQSQQRIYHGKKPYESSKSDKCFTHQIHLSIHQGIHTEEKIYKCS 280

  Fly   281 VCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRK 345
            .|...|.|..:|..|.:.|..:||:.|:.|.|.|..|..|..|.|.||||.|::|..|.|.||.|
Mouse   281 ECDKCFKNKFNLTMHQRIHKGEKPYKCSECGKCFTDKTSLRIHQRIHTGEKPYKCSECGKCFTEK 345

  Fly   346 EHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRS 410
            ..:..|.|.||||.|::|..|.|.||.|.....|...|||:.|::|..|.|.:|::.:|:.|.|.
Mouse   346 SSLRIHQRIHTGEKPYKCSECGKCFTEKSSLRIHQRIHTGEKPYKCSECDKCFTQQSYLSIHQRI 410

  Fly   411 HTNETPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRC 475
            ||.|.|::|..|.|.|:::.:.:.|...||||.|::|..|.|.||::.||..|.|.||||.|::|
Mouse   411 HTGEKPYKCSECDKCFTKQSNLSIHQRIHTGEKPYKCSECDKCFTQQSHLSIHQRIHTGEKPYKC 475

  Fly   476 SYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTR 540
            |.|.|.||::.:|..|.|.|.||.|:||:.|.|.||.|.:::.|.|.||.|.|:||:.|.|.||.
Mouse   476 SECDKCFTQQSYLSIHQRIHAGEKPYKCSECDKCFTTKGNLIIHQRIHTREKPYKCSECGKCFTE 540

  Fly   541 KEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMR 605
            |..|..|.|.|||:.|::||.|.|.||::..|:.|.|:|||:.|:||..|:|.|..|..|..|.|
Mouse   541 KSSLRIHQRIHTGEKPYKCSECDKCFTKQSKLSIHQRIHTGEKPYKCSECEKCFNEKNSLKIHQR 605

  Fly   606 QHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQEM 670
            .|:.:.|:.|:.|:|.||:|.:|..| .|.|.|::|:.|..|.|.|..||||:.|||.||:    
Mouse   606 IHTGERPYKCSECDKCFTQKSYLNIH-QRIHAGEKPYKCSECDKCFTTKGNLIIHQRIHTR---- 665

  Fly   671 ERPFACEKCPKNFICKGHLVSHMRSHSGEKPH 702
            |:|:.|.:|.|.|..|..|..|.:.|:||||:
Mouse   666 EKPYKCSECDKCFTQKSQLSIHQKIHTGEKPY 697

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368 5/19 (26%)
C2H2 Zn finger 251..271 CDD:275368 4/19 (21%)
C2H2 Zn finger 279..299 CDD:275368 6/19 (32%)
COG5048 300..723 CDD:227381 177/403 (44%)
C2H2 Zn finger 307..327 CDD:275368 8/19 (42%)
C2H2 Zn finger 335..355 CDD:275368 8/19 (42%)
C2H2 Zn finger 363..383 CDD:275368 7/19 (37%)
C2H2 Zn finger 391..411 CDD:275368 7/19 (37%)
C2H2 Zn finger 419..439 CDD:275368 5/19 (26%)
C2H2 Zn finger 447..467 CDD:275368 9/19 (47%)
C2H2 Zn finger 475..495 CDD:275368 9/19 (47%)
C2H2 Zn finger 503..523 CDD:275368 8/19 (42%)
C2H2 Zn finger 531..551 CDD:275368 9/19 (47%)
C2H2 Zn finger 559..579 CDD:275368 9/19 (47%)
C2H2 Zn finger 587..607 CDD:275368 8/19 (42%)
C2H2 Zn finger 615..636 CDD:275368 9/20 (45%)
C2H2 Zn finger 644..664 CDD:275368 11/19 (58%)
C2H2 Zn finger 676..696 CDD:275368 7/19 (37%)
C2H2 Zn finger 704..722 CDD:275368
Zfp534XP_036019448.1 KRAB 49..89 CDD:396083
C2H2 Zn finger 223..243 CDD:275368 5/19 (26%)
C2H2 Zn finger 255..271 CDD:275368 4/15 (27%)
COG5048 263..676 CDD:227381 178/417 (43%)
C2H2 Zn finger 279..299 CDD:275368 6/19 (32%)
C2H2 Zn finger 307..327 CDD:275368 8/19 (42%)
C2H2 Zn finger 335..355 CDD:275368 8/19 (42%)
C2H2 Zn finger 363..383 CDD:275368 7/19 (37%)
C2H2 Zn finger 391..411 CDD:275368 7/19 (37%)
C2H2 Zn finger 419..439 CDD:275368 5/19 (26%)
C2H2 Zn finger 447..467 CDD:275368 9/19 (47%)
C2H2 Zn finger 475..495 CDD:275368 9/19 (47%)
C2H2 Zn finger 503..523 CDD:275368 8/19 (42%)
C2H2 Zn finger 531..551 CDD:275368 9/19 (47%)
C2H2 Zn finger 559..579 CDD:275368 9/19 (47%)
C2H2 Zn finger 587..607 CDD:275368 8/19 (42%)
C2H2 Zn finger 615..635 CDD:275368 9/20 (45%)
C2H2 Zn finger 643..663 CDD:275368 11/19 (58%)
C2H2 Zn finger 671..691 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 505 1.000 Inparanoid score I1328
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100020
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.950

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