DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and zgc:174653

DIOPT Version :10

Sequence 1:NP_477243.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_001427700.1 Gene:zgc:174653 / 100141328 ZFINID:ZDB-GENE-080218-2 Length:415 Species:Danio rerio


Alignment Length:376 Identity:138/376 - (36%)
Similarity:194/376 - (51%) Gaps:38/376 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   293 ERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTG 357
            |:|....:.:||   |:.:||.:.:.||     ::..|..|.|:...|:|::|.::..:.|.|  
Zfish    45 EKHQDIPTDEKP---TLTKKTSSHRRHL-----NYKSECNFSCKQSRKSFSQKPNLDVYTRVH-- 99

  Fly   358 ETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEIC 422
                         .|::||.             |..|||.:.:...|..|||.|..|..:.|:.|
Zfish   100 -------------NREKHYT-------------CKQCGKSFPKIHFLKAHMRIHIGERSYTCQQC 138

  Fly   423 GKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEH 487
            ||.|....:...|:..||||.|:.|..|.|:|.:..:|..|:|.||||....|:.|.|:|.:|::
Zfish   139 GKIFHYARNLAAHMRIHTGEKPYSCPQCGKSFKQNNNLEVHMRTHTGERSFTCTQCGKSFAKKQN 203

  Fly   488 LVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHT 552
            |..|:|.||||.||.||.|.|:|..|.....|.|.||||.|::||.|.|:|..|....||:|.||
Zfish   204 LKIHMRIHTGEKPFTCTECGKSFRCKSTFNIHKRTHTGEKPYRCTECGKSFPNKSTFNNHMRIHT 268

  Fly   553 GDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNV 617
            |:.|:||:.|.|:|.||..|..|||.|||:....|..|.|:||.|..|.|||..|:......|:.
Zfish   269 GEKPYRCTECGKSFIRKSTLNYHVRTHTGEKLFACVQCGKSFTTKLSLMNHMNGHTGTIVFTCDQ 333

  Fly   618 CNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQ 668
            |.|..|||:.:..|| :.|:|:| |.|..|||.|..:.:|..|.:.|...|
Zfish   334 CGKSLTRKDSIKRHM-KTHSGER-FRCSECGKDFKHERSLRAHMKLHNAEQ 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_477243.1 C2H2 Zn finger 223..243 CDD:275368
C2H2 Zn finger 251..271 CDD:275368
C2H2 Zn finger 279..299 CDD:275368 2/5 (40%)
COG5048 300..723 CDD:227381 136/369 (37%)
C2H2 Zn finger 307..327 CDD:275368 5/19 (26%)
C2H2 Zn finger 335..355 CDD:275368 5/19 (26%)
C2H2 Zn finger 363..383 CDD:275368 3/19 (16%)
C2H2 Zn finger 391..411 CDD:275368 8/19 (42%)
C2H2 Zn finger 419..439 CDD:275368 6/19 (32%)
C2H2 Zn finger 447..467 CDD:275368 7/19 (37%)
C2H2 Zn finger 475..495 CDD:275368 8/19 (42%)
C2H2 Zn finger 503..523 CDD:275368 8/19 (42%)
C2H2 Zn finger 531..551 CDD:275368 9/19 (47%)
C2H2 Zn finger 559..579 CDD:275368 10/19 (53%)
C2H2 Zn finger 587..607 CDD:275368 10/19 (53%)
C2H2 Zn finger 615..636 CDD:275368 8/20 (40%)
C2H2 Zn finger 644..664 CDD:275368 7/19 (37%)
C2H2 Zn finger 676..696 CDD:275368
C2H2 Zn finger 704..722 CDD:275368
zgc:174653NP_001427700.1 None
Blue background indicates that the domain is not in the aligned region.

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