DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and ZSCAN30

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_001106205.1 Gene:ZSCAN30 / 100101467 HGNCID:33517 Length:494 Species:Homo sapiens


Alignment Length:263 Identity:94/263 - (35%)
Similarity:127/263 - (48%) Gaps:27/263 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   321 DNHFRSHTGETPFRCQYCAKTFTRK---EHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMW 382
            |.||             ...||.|:   ||.|  :..|..|         .||:...:.:.....
Human   254 DRHF-------------SLATFNRRIPTEHSV--LESHESE---------GSFSMNSNDITQQSV 294

  Fly   383 HTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTGETPHRC 447
            .|.:..::|..|||.:.:...|..|.|.||.|.|:.|:.|||:||.......|...|:||.|:.|
Human   295 DTREKLYECFDCGKAFCQSSKLIRHQRIHTGERPYACKECGKAFSLSSDLVRHQRIHSGEKPYEC 359

  Fly   448 DFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTR 512
            ..|.|.|.....|:.|.|.||||.|:.|..|.|.|:|...|:.|.:.|||:..::|..|.|||.|
Human   360 CECGKAFRGSSELIRHRRIHTGEKPYECGECGKAFSRSSALIQHKKIHTGDKSYECIACGKAFGR 424

  Fly   513 KDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVR 577
            ...::.|.|.||||.|::|..|.|:|.:...||.|.|.|||:.|:.||.|:|||..:..|..|.|
Human   425 SSILIEHQRIHTGEKPYECNECGKSFNQSSALTQHQRIHTGEKPYECSECRKTFRHRSGLMQHQR 489

  Fly   578 LHT 580
            .||
Human   490 THT 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368
C2H2 Zn finger 251..271 CDD:275368
C2H2 Zn finger 279..299 CDD:275368
COG5048 300..723 CDD:227381 94/263 (36%)
C2H2 Zn finger 307..327 CDD:275368 3/5 (60%)
C2H2 Zn finger 335..355 CDD:275368 6/22 (27%)
C2H2 Zn finger 363..383 CDD:275368 2/19 (11%)
C2H2 Zn finger 391..411 CDD:275368 7/19 (37%)
C2H2 Zn finger 419..439 CDD:275368 7/19 (37%)
C2H2 Zn finger 447..467 CDD:275368 7/19 (37%)
C2H2 Zn finger 475..495 CDD:275368 7/19 (37%)
C2H2 Zn finger 503..523 CDD:275368 8/19 (42%)
C2H2 Zn finger 531..551 CDD:275368 8/19 (42%)
C2H2 Zn finger 559..579 CDD:275368 9/19 (47%)
C2H2 Zn finger 587..607 CDD:275368
C2H2 Zn finger 615..636 CDD:275368
C2H2 Zn finger 644..664 CDD:275368
C2H2 Zn finger 676..696 CDD:275368
C2H2 Zn finger 704..722 CDD:275368
ZSCAN30NP_001106205.1 SCAN 44..154 CDD:128708
SCAN 44..122 CDD:280241
COG5048 281..>360 CDD:227381 25/78 (32%)
zf-C2H2 301..323 CDD:278523 7/21 (33%)
C2H2 Zn finger 303..323 CDD:275368 7/19 (37%)
zf-H2C2_2 316..339 CDD:290200 11/22 (50%)
COG5048 <328..479 CDD:227381 64/150 (43%)
C2H2 Zn finger 331..351 CDD:275368 7/19 (37%)
zf-H2C2_2 343..366 CDD:290200 8/22 (36%)
C2H2 Zn finger 359..379 CDD:275368 7/19 (37%)
zf-H2C2_2 371..396 CDD:290200 12/24 (50%)
C2H2 Zn finger 387..407 CDD:275368 7/19 (37%)
zf-H2C2_2 399..424 CDD:290200 10/24 (42%)
C2H2 Zn finger 415..435 CDD:275368 8/19 (42%)
zf-H2C2_2 428..452 CDD:290200 11/23 (48%)
C2H2 Zn finger 443..463 CDD:275368 8/19 (42%)
zf-H2C2_2 455..480 CDD:290200 14/24 (58%)
C2H2 Zn finger 471..491 CDD:275368 9/19 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23226
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.100

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