DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp33B and Tspan17

DIOPT Version :9

Sequence 1:NP_523552.1 Gene:Tsp33B / 34590 FlyBaseID:FBgn0032376 Length:326 Species:Drosophila melanogaster
Sequence 2:XP_006517477.1 Gene:Tspan17 / 74257 MGIID:1921507 Length:281 Species:Mus musculus


Alignment Length:262 Identity:59/262 - (22%)
Similarity:90/262 - (34%) Gaps:85/262 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 YLFG----IYVFGAQVVVTFLCSIAMWRRIW-RRRCTPNIRLLLS------VWAFYSCVIIAS-- 103
            :|||    .:|.||    .|| :|.:|  .| .:....||..|..      ||.|   |::..  
Mouse    20 FLFGFNIVFWVLGA----LFL-AIGLW--AWGEKGVLSNISALTDLGGLDPVWLF---VVVGGVM 74

  Fly   104 ---GF-GCV------------WNLYRGV----------------DVLENAADTSLTRGIDMYYSC 136
               || ||:            ::::.|:                |.:.:..:..:...:..|...
Mouse    75 SVLGFAGCIGALRENTFLLKFFSVFLGLIFFLELAAGILAFVFKDWIRDQLNLFINNNVKAYRDD 139

  Fly   137 PEWKLLWDGLQWHKECCGVHGYKDW-MNAEWMPRRENNCTSM------VLAPFACCKRSCDSCFN 194
            .:.:.|.|..|.:..|||..|..|| :|..:      |||.:      ...||:||.|.      
Mouse   140 LDLQNLIDFAQEYWSCCGARGPNDWNLNIYF------NCTDLNPSRERCGVPFSCCVRD------ 192

  Fly   195 NFLPSE---GQSIGGNSRQPFPALTVDSINANGCLPAFVSAVW---NCFYILMALWVLALKFLIV 253
               |:|   ....|.:.|.........||...||:..|..  |   |...:...|..:||..:..
Mouse   193 ---PAEDVLNTQCGYDIRLKLELEQQGSIYTKGCVGQFEK--WLQDNLIVVAGVLVGIALLQIFG 252

  Fly   254 LC 255
            ||
Mouse   253 LC 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp33BNP_523552.1 Tetraspannin 20..256 CDD:278750 59/262 (23%)
CD151_like_LEL 112..237 CDD:239408 32/153 (21%)
Tspan17XP_006517477.1 TM4SF9_like_LEL 115..235 CDD:239412 30/136 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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