DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp33B and tspan15

DIOPT Version :10

Sequence 1:NP_523552.1 Gene:Tsp33B / 34590 FlyBaseID:FBgn0032376 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_001039054.1 Gene:tspan15 / 733836 XenbaseID:XB-GENE-5960404 Length:297 Species:Xenopus tropicalis


Alignment Length:265 Identity:62/265 - (23%)
Similarity:111/265 - (41%) Gaps:72/265 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 VIGLLILVVTAYYHTVLTGYLSDIECRLVYGYLFGIYVFGAQV---------VVTFLCSIAMWRR 76
            :||..:|.:         |..:::| |..|..|.||::..:.:         ||:|:..:|..| 
 Frog    30 LIGAFVLAI---------GIYAEVE-RQKYKTLHGIFLAPSIILILLGVLMFVVSFIGVLASLR- 83

  Fly    77 IWRRRCTPNIRLL-LSVWAFYSCVIIASGFGCVWNLYR--GVDVLENAADTSLTRGIDMYYSCPE 138
                   .|:.|| :.::....|:|:....|.:..::|  .:|:|.:    ::.:||..||...:
 Frog    84 -------DNVCLLKVFMYTLVVCLILELVGGIIALIFRHQTMDLLNH----NIGKGIRNYYDDLD 137

  Fly   139 WKLLWDGLQWHKECCGVHGYKDWMNAEWMPRRENNCTSM-VLA---PFACCKRSCDSCFNNFLPS 199
            :|.:.|..|....|||...|.||...|:     :.|::. .||   |:.||.|:.....|...  
 Frog   138 FKNIMDFTQKQFRCCGGKDYLDWKKNEY-----HECSAPGPLACGVPYTCCIRNKTDVMNTMC-- 195

  Fly   200 EGQSIGGNSRQPFPALTVDSINA------NGCLPAFVSAVWNCF---YILMA---LWVLALKFLI 252
                       .:.|:..:.::|      .||..|.:  :|  |   |.:||   |.:|..:||.
 Frog   196 -----------GYKAMNYERLDAMKFIYVRGCTDAVI--IW--FLDNYTIMAGVLLGILLPQFLG 245

  Fly   253 VLCCM 257
            :|.|:
 Frog   246 ILLCL 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp33BNP_523552.1 CD151_like_LEL 112..237 CDD:239408 31/136 (23%)
tspan15NP_001039054.1 Tetraspanin 17..>154 CDD:459767 33/145 (23%)
penumbra_like_LEL 111..228 CDD:239411 32/142 (23%)

Return to query results.
Submit another query.