DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp33B and Tspan3

DIOPT Version :10

Sequence 1:NP_523552.1 Gene:Tsp33B / 34590 FlyBaseID:FBgn0032376 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_062767.3 Gene:Tspan3 / 56434 MGIID:1928098 Length:253 Species:Mus musculus


Alignment Length:269 Identity:62/269 - (23%)
Similarity:93/269 - (34%) Gaps:72/269 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SVYLHLLLITEAVIGLLILVVTAYYHTVLTGYLSDIECRLVYGYLFGIYVFGAQVVVTFLCSIAM 73
            :|.:.|.||.....|:| ..|.||.......|  |.....||.....:.:.....::..:..|..
Mouse    11 TVLVFLNLIFWGAAGIL-CYVGAYVFITYDDY--DHFFEDVYTLFPAVVIIAVGALLFIIGLIGC 72

  Fly    74 WRRIWRRRC--TPNIRLLLSVWAFYSCVIIASGFGCVWNLYRGVDVLENAADTSL---------- 126
            ...|...||  ...:.:||.|:. ...|::..|:     :||.  .:||..|.|:          
Mouse    73 CATIRESRCGLATFVFILLLVFV-TEVVVVVLGY-----VYRA--KVENEVDRSIQKVYKTYNGT 129

  Fly   127 -----TRGIDMYYSCPEWKLLWDGLQWHKECCGVHGYKDWMNAEWMPRRENNCTSMVLAPFACCK 186
                 :|.||.             :|....|||:|.|.||.|.:|....:|..     .|.:||:
Mouse   130 NSDAASRAIDY-------------VQRQLHCCGIHNYSDWENTDWFKETKNQS-----VPLSCCR 176

  Fly   187 RSCDSCFNNFLPSEGQSIGGNSRQPFPALTVDSINANGCLPAFVSAVWNCFYILM-----ALWVL 246
            .:..||            .|:...|      ..:.|.||....|..:..   |||     ||...
Mouse   177 ETAKSC------------NGSLANP------SDLYAEGCEALVVKKLQE---ILMHVIWAALAFA 220

  Fly   247 ALKFLIVLC 255
            |::.|.:||
Mouse   221 AIQLLGMLC 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp33BNP_523552.1 CD151_like_LEL 112..237 CDD:239408 31/139 (22%)
Tspan3NP_062767.3 Tetraspanin 9..235 CDD:459767 62/269 (23%)
TM4SF8_like_LEL 104..210 CDD:239416 33/151 (22%)

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