DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp33B and tspan4b

DIOPT Version :10

Sequence 1:NP_523552.1 Gene:Tsp33B / 34590 FlyBaseID:FBgn0032376 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_001076276.1 Gene:tspan4b / 556934 ZFINID:ZDB-GENE-070410-127 Length:232 Species:Danio rerio


Alignment Length:153 Identity:37/153 - (24%)
Similarity:58/153 - (37%) Gaps:29/153 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 LSDIECRLVYGYLFGIYVFGAQVVVTFLCSIAMWRRIWRRRCTPNIRLLLSVWAFYSCVIIAS-G 104
            ||.....||.|        |..:|..||..:...:   .::|     |||:.:.....:::.. .
Zfish    53 LSAANLLLVAG--------GVTMVTGFLGCLGALK---EQKC-----LLLTFFVILLILVLTEVV 101

  Fly   105 FGCVWNLYRGVDVLENAADTSLTRGIDMYYSCPEWKLLWDGLQWHKECCGVHGYKDWMNAEWMPR 169
            ...|.:||.  :.|:..|...|..|:..|......:..||.:|...:||||..:.||        
Zfish   102 LILVLSLYH--EELDKKAKDDLREGMKGYSKNDGLRKSWDNMQMIFKCCGVSNHTDW-------- 156

  Fly   170 RENNCTSMVLAPFACCKRSCDSC 192
              :|.|:....|.:||.....||
Zfish   157 --HNKTTDGKLPGSCCSNDPSSC 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp33BNP_523552.1 CD151_like_LEL 112..237 CDD:239408 22/81 (27%)
tspan4bNP_001076276.1 Tetraspanin 11..222 CDD:459767 37/153 (24%)
NET-5_like_LEL 108..196 CDD:239418 23/82 (28%)

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