DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp33B and tspan34b

DIOPT Version :10

Sequence 1:NP_523552.1 Gene:Tsp33B / 34590 FlyBaseID:FBgn0032376 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_956702.2 Gene:tspan34b / 393380 ZFINID:ZDB-GENE-040426-1362 Length:243 Species:Danio rerio


Alignment Length:236 Identity:56/236 - (23%)
Similarity:86/236 - (36%) Gaps:57/236 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 LTGYLSDIECRLVYGYLFGIYVFGAQVVVT-FL-CSIAMWRRIWRRRCTPNIRLLLSVWAFYSCV 99
            |.|..|.:...|..|||  :...||.:||. || |..|    |...||     :|:..:.....:
Zfish    46 LPGASSQMGQVLNVGYL--LIALGAVLVVLGFLGCCGA----IKESRC-----MLMLFFIIILII 99

  Fly   100 IIASGFGCVWNLYRGVDVLENAADTSLTR-GIDMYYSC-------PEWKLLWDGLQWHKECCGVH 156
            .||...|.:..|     .....|:|.:.: |:|...|.       |:...||:......:|||.:
Zfish   100 FIAEVAGAIVIL-----AFRPLAETLIKQLGVDAVKSLQSDFGKNPDVTGLWNTTMTGMKCCGFN 159

  Fly   157 GYKDWMNAEWMPRRENNCTSMVLAPFACCKRSCDSCFNNFLPSEGQSIGGNSRQPFPALTVDSIN 221
            .|.|:.|:.::...:|       .|..||..|                      |.....|.:..
Zfish   160 NYTDFTNSFFVNSTKN-------YPVQCCNTS----------------------PCNQAAVMNST 195

  Fly   222 ANGCLPAFVSAV-WNCFYIL-MALWVLALKFLIVLCCMTKF 260
            ..||.||.:..| .|...|: :||.:.||:...::..|..:
Zfish   196 VTGCFPALIKLVDKNAVIIIAVALGIAALELAAMIVSMVLY 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp33BNP_523552.1 CD151_like_LEL 112..237 CDD:239408 27/133 (20%)
tspan34bNP_956702.2 Tetraspanin 7..237 CDD:459767 56/236 (24%)
tetraspanin_LEL <139..211 CDD:351888 21/100 (21%)

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