DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp33B and tspan2a

DIOPT Version :10

Sequence 1:NP_523552.1 Gene:Tsp33B / 34590 FlyBaseID:FBgn0032376 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_001018160.1 Gene:tspan2a / 378854 ZFINID:ZDB-GENE-050522-511 Length:211 Species:Danio rerio


Alignment Length:250 Identity:49/250 - (19%)
Similarity:85/250 - (34%) Gaps:82/250 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 LSDIE-CRLVYGYLFGIYVFGAQVVVTFLCSIAMWRRIWRRRCTPNIRLLLS--------VWAFY 96
            :|::: |.....||..::.|...:..:.:.::.:|.|.     .|:...|||        ..|.|
Zfish     1 MSEVQGCMKCVKYLLFVFNFIFWLSGSLVLAVGLWLRF-----DPDTTSLLSENDAPENFFIAVY 60

  Fly    97 SCVIIASG--------FGCVWNLYRGVDVLENAADTSLTRGIDMYYSCPEWKLLWDGLQWHKECC 153
              ::|.:|        ||| :...|....|           :..:::|   .||..|.:   ...
Zfish    61 --ILIGAGGIMMIVGFFGC-FGAVRESQCL-----------LGSFFAC---LLLIFGAE---VAA 105

  Fly   154 GVHGY-------KDWMN-AEWMPRRENN--CTSMVLAPFACCKRSCDSCFNNFLPSEGQSIGGNS 208
            ||.|:       |:..| .|...:.||.  .||...:...||                    |..
Zfish   106 GVFGFLNKDQIIKEVQNYYESATKMENGTVITSAFHSVLDCC--------------------GTE 150

  Fly   209 RQPFPALTVDSINANGCLPA----FVSAVWNCFYI---LMALWVLALKFLIVLCC 256
            ..|....|..:   ..|:.|    |...::...|:   :..:.|:.:.|.:||||
Zfish   151 SSPIETCTEGN---KDCVQAIEDFFNEKLFIIGYVGIGIAGVMVIGMIFSMVLCC 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp33BNP_523552.1 CD151_like_LEL 112..237 CDD:239408 24/138 (17%)
tspan2aNP_001018160.1 Tetraspanin 11..202 CDD:459767 45/238 (19%)

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