DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp33B and Tsp42Ef

DIOPT Version :9

Sequence 1:NP_523552.1 Gene:Tsp33B / 34590 FlyBaseID:FBgn0032376 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_523632.2 Gene:Tsp42Ef / 35615 FlyBaseID:FBgn0033127 Length:220 Species:Drosophila melanogaster


Alignment Length:265 Identity:52/265 - (19%)
Similarity:104/265 - (39%) Gaps:80/265 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ASVYLHLLLITEAVIGLLILVVTAYYHTVLTGY-LSDIECRLVYGYLFGIYVFGAQVVVTFLCSI 71
            :||.| ::...:.:..||.||:.::...|...| |::|.....|||: |:   ||..::     :
  Fly     5 SSVKL-IVYALDVLCTLLALVLISFGIYVAVSYNLNEIGQLTAYGYV-GL---GAAALL-----V 59

  Fly    72 AMWRRI--WRRR--CTPNIRLLLSVWAFYSCVIIASGFGCVWNLYRGVDVLENAADTSLTRGIDM 132
            .:|..:  ||..  ||....:.|       |::|.:.|..|:.|.    ..|....::|...::.
  Fly    60 VLWGYLSAWRENVCCTVTFIIFL-------CLVIIAQFAVVYLLI----TQEKTVASNLANALEA 113

  Fly   133 YY----SCPEWKLLWDGLQWHKECCGVHGYKDWMNAEWMPRRENNCTSMVLAPFACCKRSCDSCF 193
            .:    :.|....|:.  .|. :|||....:|::..|.:|.                    ::||
  Fly   114 TWEEELNSPGAMSLYQ--NWF-QCCGRGSPQDYIVNERLPP--------------------ETCF 155

  Fly   194 NNFLPSEGQSIGGNSRQPFPALTVDSINANGCLPAF------VSAVWNCFYILMALWVLALKFLI 252
            .|.          :..:|      :::...||...|      ::.::|    ::||.::..:.|:
  Fly   156 RNH----------DKSKP------ENLIHTGCRVEFENYWQHLTKIFN----ILALVLIGFELLL 200

  Fly   253 -VLCC 256
             |:.|
  Fly   201 SVISC 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp33BNP_523552.1 Tetraspannin 20..256 CDD:278750 48/251 (19%)
CD151_like_LEL 112..237 CDD:239408 19/134 (14%)
Tsp42EfNP_523632.2 Tetraspannin 7..211 CDD:278750 51/263 (19%)
tetraspanin_LEL 103..181 CDD:239401 17/116 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449970
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.930

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