DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp33B and Tsp42Ec

DIOPT Version :9

Sequence 1:NP_523552.1 Gene:Tsp33B / 34590 FlyBaseID:FBgn0032376 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_523629.1 Gene:Tsp42Ec / 35612 FlyBaseID:FBgn0033124 Length:232 Species:Drosophila melanogaster


Alignment Length:279 Identity:60/279 - (21%)
Similarity:92/279 - (32%) Gaps:124/279 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LHLLLITEAVIGLLILVVTAYYHTVLTGYLSDIE----------------CRLVYGYL------F 54
            |:::.|...::|:|::|:.:.       .|||:.                |..|.|.|      |
  Fly    12 LYIVNIVFLIVGILLIVLGSI-------MLSDLSRFDVAGSGTDPNTIPICVTVLGGLIFVVSFF 69

  Fly    55 GIY-VF-------GAQVVVTFLCSIAMWRRIWRRRCTPNIRLLLSVWAFYSCVIIASGF-GCVWN 110
            |.| :|       ||...:.|:..|              ::|:|:.|.|    :..|.| |.:.|
  Fly    70 GCYGIFRQSVCMTGAYTSMVFVLFI--------------LQLVLTCWVF----VNRSAFLGDMSN 116

  Fly   111 LYRGVDVLENAADTSLTRGIDMYYSCPEWKLLWDG--------LQWHKECCGVHGYKDWMNAEWM 167
            |.                           .||||.        |:....|||...|.::      
  Fly   117 LV---------------------------NLLWDSHDYTAMGVLEETFGCCGDTSYTNY------ 148

  Fly   168 PRRENNCTSMVLAPFACC-----KRSCDSCFNNFLPSEGQSIGGNSR--QPFPALTVDSINANG- 224
                ||....|  |..||     :.:|::      ||..||..|.|.  :.|....:|.|..:| 
  Fly   149 ----NNIGLSV--PGTCCGYLDRQATCNT------PSVYQSRPGCSAKFEEFWNDNMDIIRWSGL 201

  Fly   225 --CLPAFV-----SAVWNC 236
              |:...|     .|:.||
  Fly   202 GLCIFDLVVFLIAGALTNC 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp33BNP_523552.1 Tetraspannin 20..256 CDD:278750 58/271 (21%)
CD151_like_LEL 112..237 CDD:239408 31/148 (21%)
Tsp42EcNP_523629.1 Tetraspannin 7..221 CDD:278750 60/279 (22%)
tetraspanin_LEL 104..193 CDD:239401 29/137 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443008
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.930

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