DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp33B and Tspan14

DIOPT Version :10

Sequence 1:NP_523552.1 Gene:Tsp33B / 34590 FlyBaseID:FBgn0032376 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_001162598.1 Gene:Tspan14 / 306324 RGDID:1305714 Length:270 Species:Rattus norvegicus


Alignment Length:271 Identity:54/271 - (19%)
Similarity:88/271 - (32%) Gaps:89/271 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 YYHTVLTGYLSDIECRLVYGYLFGIYVFGAQVV-----VTFLCSIAMW-----------RRIWRR 80
            ||.      .|:.|....|.||    :|...:|     |.|| .:.:|           .::.|.
  Rat     3 YYR------YSNAEVSCWYKYL----LFSYNIVFWLAGVVFL-GVGLWAWSEKGVLSDLTKVTRL 56

  Fly    81 RCTPNIRLLLSVWAFYSCVIIASGF-GCVWNLYRGV----------------------------D 116
            .....:.|:|.|    ..|:...|| |||..|...:                            |
  Rat    57 HGIDPVVLVLMV----GVVMFTLGFAGCVGALRENICLLKFFCGAIVLIFFLELAVAVLAFLFQD 117

  Fly   117 VLENAADTSLTRGIDMYYSCPEWKLLWDGLQWHKECCGVHGYKDW-MNAEWMPRRENNCTSMVLA 180
            .:.:.........|..|....:.:.|.|.||...:|||.:|.:|| :|..:      ||:....:
  Rat   118 WVRDRFREFFESNIRSYRDDIDLQNLIDSLQKANQCCGAYGPEDWDLNVYF------NCSGASYS 176

  Fly   181 ------PFACCKRSCDSCFNNFLPSEGQSI-----GGNSRQPFPALTVDSINANGCLPAFVSAVW 234
                  ||:||           :|...|.:     |.:.|....:...:.|...||:.|....:.
  Rat   177 REKCGVPFSCC-----------VPDPAQKVVNTQCGYDVRIQLKSKWDEFIFTKGCIQALEGWLP 230

  Fly   235 NCFYILMALWV 245
            ...||:..:::
  Rat   231 RNIYIVAGVFI 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp33BNP_523552.1 CD151_like_LEL 112..237 CDD:239408 28/164 (17%)
Tspan14NP_001162598.1 Tetraspanin 16..258 CDD:459767 49/252 (19%)
TM4SF9_like_LEL 113..233 CDD:239412 28/136 (21%)

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