DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp33B and Tspan6

DIOPT Version :10

Sequence 1:NP_523552.1 Gene:Tsp33B / 34590 FlyBaseID:FBgn0032376 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_001094142.1 Gene:Tspan6 / 302313 RGDID:1560160 Length:245 Species:Rattus norvegicus


Alignment Length:301 Identity:55/301 - (18%)
Similarity:103/301 - (34%) Gaps:92/301 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRQPFRRAS-------------VYLHLLLITEAVIGLLILVVTAYYHTVLTGYLSDIECRLVYGY 52
            |..|.||..             :|..:..||    |:::|.|..:....|..|.|.:..:.. ..
  Rat     1 MASPSRRLQTKPVITCFKSVLLIYTFIFWIT----GVILLAVGIWGKVSLENYFSLLNEKAT-NV 60

  Fly    53 LFGIYVFGAQVVV--TFLCSIAMWRRIWRRRCTPNIRLLLSVWAFYSCVI-----IASGFGCVWN 110
            .|.:...|..:::  ||.|........|          :|.::|.:..:|     :|:..|.|:.
  Rat    61 PFVLIGTGTVIILLGTFGCFATCRASAW----------MLKLYAMFLTLIFLVELVAAIVGFVFR 115

  Fly   111 LYRGVDVLENAADTSLTRGIDMYYSCPEWKL-LWDGLQWHKECCGVHGYKDWMNAEWMPRRENNC 174
                 ..::|:..::....:..|.|..:::. ..|.:|....||||..|:||        :..|.
  Rat   116 -----HEIKNSFKSNYENALKEYNSTRDYRSEAVDKIQSTLHCCGVTNYRDW--------KGTNY 167

  Fly   175 TSMVLAPFACCKRSCDSCFNNFLPSEGQSIGGNSRQPFPALTVDSINANGCLPAFVSAVWN---- 235
            .|....|.:|||  .:.|                   :|....|.:|..||....::.:.:    
  Rat   168 YSETGFPKSCCK--LEGC-------------------YPQRDADKVNEEGCFIKVMTTIESEMGV 211

  Fly   236 ---------CFYILMALWVLALKFLIVLCCMTKFIVHRQNE 267
                     ||.::         .:.:..|:::.|.:.|.|
  Rat   212 VAGISFGVACFQLI---------GIFLAYCLSRAITNNQYE 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp33BNP_523552.1 CD151_like_LEL 112..237 CDD:239408 24/138 (17%)
Tspan6NP_001094142.1 Tetraspanin 17..235 CDD:459767 48/275 (17%)
TM4SF2_6_like_LEL 112..209 CDD:239414 25/130 (19%)

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