DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp33B and Tspan4

DIOPT Version :10

Sequence 1:NP_523552.1 Gene:Tsp33B / 34590 FlyBaseID:FBgn0032376 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_001426627.1 Gene:Tspan4 / 293627 RGDID:1305810 Length:333 Species:Rattus norvegicus


Alignment Length:190 Identity:43/190 - (22%)
Similarity:66/190 - (34%) Gaps:54/190 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 CRLVYGYLFGI-YVFGAQVVVTFL--CSIAMWRRIWRRRCTPNIRLLLSVWAFYSCV-------- 99
            |.:..|.|.|: |:..|..::.:|  |.: :...||......|...|.|.:...|..        
  Rat    94 CSMARGCLQGVKYLMFAFNLLFWLGGCGV-LGVGIWLAATQGNFATLSSSFPSLSAANLLIVTGT 157

  Fly   100 -IIASGF-GCVWNL----------------------------YRGVDVLENAADTSLTRGIDMYY 134
             ::|.|| ||:..|                            :...|.:::.|...|.:|:.:|.
  Rat   158 FVMAIGFVGCIGALKENKCLLLTFFVLLLLVFLLEATIAVLFFAYSDKIDSYAQQDLKKGLHLYG 222

  Fly   135 SCPEWKL--LWDGLQWHKECCGVHGYKDWMNAEWMPRRENNCTSMVLAPFACCKRSCDSC 192
            :.....|  .|..:|....||||..|.||...       .|.|.:   |.:||....|||
  Rat   223 TEGNVGLTNAWSIIQTDFRCCGVSNYTDWFEV-------YNATRV---PDSCCLEFSDSC 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp33BNP_523552.1 CD151_like_LEL 112..237 CDD:239408 23/83 (28%)
Tspan4NP_001426627.1 None

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