DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp33B and Tspan12

DIOPT Version :10

Sequence 1:NP_523552.1 Gene:Tsp33B / 34590 FlyBaseID:FBgn0032376 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_766595.1 Gene:Tspan12 / 269831 MGIID:1889818 Length:305 Species:Mus musculus


Alignment Length:191 Identity:45/191 - (23%)
Similarity:74/191 - (38%) Gaps:25/191 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LHLLLITEAVIGLLILVVTAYYHTVLTGYLS-DIECRLVYGYLFGIYVFGAQVVVTFLCSIAMWR 75
            |:.|.:...::.:.:|.|:|:....|...|: ..|.|:....:...:.....|::...|.:.:..
Mouse    14 LYALNLLFWLMSISVLAVSAWMRDYLNNVLTLTAETRVEEAVILTYFPVVHPVMIAVCCFLIIVG 78

  Fly    76 RIWRRRC-TPNIRLLLSVWAFYS-----CVIIASGFGCVWNLYRGVDVLENAADTSLTRGIDMYY 134
            .:  ..| |....|||..|.|.:     ||.:|.|   ||...:.|.|....:|....:.....|
Mouse    79 ML--GYCGTVKRNLLLLAWYFGTLLVIFCVELACG---VWTYEQEVMVPVQWSDMVTLKARMTNY 138

  Fly   135 SCPEWKLL---WDGLQWHKECCGVHGYKDWMNAEWMPRRENNCTSMVLAPFACCKRSCDSC 192
            ..|.::.|   |:..|...:||||..:.||:          ..|.|...|.:||.|....|
Mouse   139 GLPRYRWLTHAWNYFQREFKCCGVVYFTDWL----------EMTEMDWPPDSCCVREFPGC 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp33BNP_523552.1 CD151_like_LEL 112..237 CDD:239408 21/84 (25%)
Tspan12NP_766595.1 Tetraspanin 10..246 CDD:459767 45/191 (24%)
TM4SF12_like_LEL 116..218 CDD:239410 21/84 (25%)

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